Gene name: PRE7
Reference locus (S288C): YBL041W
Gene biotype: protein_coding
Description: Proteasome core particle subunit beta 6; Beta 6 subunit of the 20S proteasome
Top 10 interactors (score): PUP3 (0.999); RPT3 (0.999); BLM10 (0.999); PRE9 (0.999); PUP2 (0.999); PRE6 (0.999); RPT5 (0.999); PRE4 (0.999); RPT4 (0.999); PRE3 (0.999); RPN7 (0.999); RPN9 (0.999); PUP1 (0.999); RPN10 (0.999); RPN8 (0.999); UBP6 (0.999); RPN5 (0.999); PRE2 (0.999); RPN12 (0.999); RPN11 (0.999)
Homologues (species, bitscore): PSMB1 (Homo sapiens, 209.1); Psmb1 (Mus musculus, 207.6); psmb1 (Danio rerio, 214.2); psmb1 (Xenopus tropicalis, 188.0); Prosbeta6 (Drosophila melanogaster, 169.9); pbs-6 (Caenorhabditis elegans, 146.4); PBF1 (Arabidopsis thaliana, 181.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:134854-135579:+ | gene-YBL041W_AKU4011 | rna-NM_001178281.1_AKU4011 | cds-NP_009512.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:125687-126412:+ | gene-YBL041W_BG1 | rna-NM_001178281.1_BG1 | cds-NP_009512.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:135457-136182:+ | gene-YBL041W_Bruggeman | rna-NM_001178281.1_Bruggeman | cds-NP_009512.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:138084-138809:+ | gene-YBL041W_CAT1 | rna-NM_001178281.1_CAT1 | cds-NP_009512.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:127394-128119:+ | gene-YBL041W_CBS1585 | rna-NM_001178281.1_CBS1585 | cds-NP_009512.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:135918-136643:+ | gene-YBL041W_CBS436 | rna-NM_001178281.1_CBS436 | cds-NP_009512.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:226148-226873:+ | gene-YBL041W_CBS6412 | rna-NM_001178281.1_CBS6412 | cds-NP_009512.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:132965-133690:+ | gene-YBL041W_CBS6413 | rna-NM_001178281.1_CBS6413 | cds-NP_009512.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:135004-135729:+ | gene-YBL041W_CENPK1137D | rna-NM_001178281.1_CENPK1137D | cds-NP_009512.1_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:148818-149543:+ | gene-YBL041W_EthanolRed | rna-NM_001178281.1_EthanolRed | cds-NP_009512.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:149668-150393:+ | gene-YBL041W_FaliES1 | rna-NM_001178281.1_FaliES1 | cds-NP_009512.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000072.1:52309-53034:+ | gene-YBL041W_JAY291 | rna-NM_001178281.1_JAY291 | cds-NP_009512.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:134829-135554:+ | gene-YBL041W_MUCL30387 | rna-NM_001178281.1_MUCL30387 | cds-NP_009512.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:136108-136833:+ | gene-YBL041W_MUCL30388 | rna-NM_001178281.1_MUCL30388 | cds-NP_009512.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:127569-128294:+ | gene-YBL041W_MUCL39482 | rna-NM_001178281.1_MUCL39482 | cds-NP_009512.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:134419-135144:+ | gene-YBL041W_MUCL42920 | rna-NM_001178281.1_MUCL42920 | cds-NP_009512.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:141044-141769:+ | gene-YBL041W_NCIM3186 | rna-NM_001178281.1_NCIM3186 | cds-NP_009512.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:128707-129432:+ | gene-YBL041W_NCYC1407 | rna-NM_001178281.1_NCYC1407 | cds-NP_009512.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:134986-135711:+ | gene-YBL041W_PE2H3 | rna-NM_001178281.1_PE2H3 | cds-NP_009512.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:132630-133355:+ | gene-YBL041W_PE2H4 | rna-NM_001178281.1_PE2H4 | cds-NP_009512.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:141247-141972:+ | gene-YBL041W_S288C | rna-NM_001178281.1_S288C | cds-NP_009512.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000051.1:25839-26564:+ | gene-YBL041W_SA1 | rna-NM_001178281.1_SA1 | cds-NP_009512.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:149632-150357:+ | gene-YBL041W_ThermosaccDry | rna-NM_001178281.1_ThermosaccDry | cds-NP_009512.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:131817-132542:+ | gene-YBL041W_VR1 | rna-NM_001178281.1_VR1 | cds-NP_009512.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:126336-127061:+ | gene-YBL041W_ZTW1 | rna-NM_001178281.1_ZTW1 | cds-NP_009512.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:161225-161950:+ | gene-YBL041W_Sparadoxus | rna-NM_001178281.1_Sparadoxus | cds-NP_009512.1_Sparadoxus | 93.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |