Gene name: PRE5
Reference locus (S288C): YMR314W
Gene biotype: protein_coding
Description: Alpha 6 subunit of the 20S proteasome; protein abundance increases in response to DNA replication stress; Belongs to the peptidase T1A family
Top 10 interactors (score): RPN10 (0.999); RPN11 (0.999); PRE2 (0.999); UMP1 (0.999); RPN2 (0.999); RPT1 (0.999); RPN5 (0.999); RPN12 (0.999); BLM10 (0.999); ADD66 (0.999); PRE3 (0.999); RPN7 (0.999); RPN9 (0.999); PUP1 (0.999); RPN8 (0.999); RPT5 (0.999); UBP6 (0.999); PRE6 (0.999); PUP2 (0.999); PRE9 (0.999)
Homologues (species, bitscore): PSMA1 (Homo sapiens, 251.1); Psma1 (Mus musculus, 255.4); psma1 (Danio rerio, 250.0); psma1 (Xenopus tropicalis, 202.2); Prosalpha6T (Drosophila melanogaster, 222.2); pas-6 (Caenorhabditis elegans, 242.7); PAF1 (Arabidopsis thaliana, 228.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:941267-941971:+ | gene-YMR314W_AKU4011 | rna-NM_001182825.1_AKU4011 | cds-NP_014045.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:12240-12944:- | gene-YMR314W_BG1 | rna-NM_001182825.1_BG1 | cds-NP_014045.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:886676-887380:+ | gene-YMR314W_Bruggeman | rna-NM_001182825.1_Bruggeman | cds-NP_014045.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:889241-889945:+ | gene-YMR314W_CAT1 | rna-NM_001182825.1_CAT1 | cds-NP_014045.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:873520-874224:+ | gene-YMR314W_CBS1585 | rna-NM_001182825.1_CBS1585 | cds-NP_014045.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:895809-896513:+ | gene-YMR314W_CBS436 | rna-NM_001182825.1_CBS436 | cds-NP_014045.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:984241-984945:+ | gene-YMR314W_CBS6412 | rna-NM_001182825.1_CBS6412 | cds-NP_014045.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:872641-873345:+ | gene-YMR314W_CBS6413 | rna-NM_001182825.1_CBS6413 | cds-NP_014045.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:896269-896973:+ | gene-YMR314W_CENPK1137D | rna-NM_001182825.1_CENPK1137D | cds-NP_014045.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:933271-933975:+ | gene-YMR314W_EthanolRed | rna-NM_001182825.1_EthanolRed | cds-NP_014045.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:879512-880216:+ | gene-YMR314W_FaliES1 | rna-NM_001182825.1_FaliES1 | cds-NP_014045.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000096.1:14791-15495:- | gene-YMR314W_JAY291 | rna-NM_001182825.1_JAY291 | cds-NP_014045.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:879789-880493:+ | gene-YMR314W_MUCL30387 | rna-NM_001182825.1_MUCL30387 | cds-NP_014045.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:889278-889982:+ | gene-YMR314W_MUCL30388 | rna-NM_001182825.1_MUCL30388 | cds-NP_014045.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:874581-875285:+ | gene-YMR314W_MUCL39482 | rna-NM_001182825.1_MUCL39482 | cds-NP_014045.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:882892-883596:+ | gene-YMR314W_MUCL42920 | rna-NM_001182825.1_MUCL42920 | cds-NP_014045.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:901663-902367:+ | gene-YMR314W_NCIM3186 | rna-NM_001182825.1_NCIM3186 | cds-NP_014045.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:874241-874945:+ | gene-YMR314W_NCYC1407 | rna-NM_001182825.1_NCYC1407 | cds-NP_014045.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:889544-890248:+ | gene-YMR314W_PE2H3 | rna-NM_001182825.1_PE2H3 | cds-NP_014045.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:885527-886231:+ | gene-YMR314W_PE2H4 | rna-NM_001182825.1_PE2H4 | cds-NP_014045.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:901709-902413:+ | gene-YMR314W_S288C | rna-NM_001182825.1_S288C | cds-NP_014045.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000036.1:79503-80207:+ | gene-YMR314W_SA1 | rna-NM_001182825.1_SA1 | cds-NP_014045.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:875667-876371:+ | gene-YMR314W_ThermosaccDry | rna-NM_001182825.1_ThermosaccDry | cds-NP_014045.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:889396-890100:+ | gene-YMR314W_VR1 | rna-NM_001182825.1_VR1 | cds-NP_014045.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:290883-291587:+ | gene-YMR314W_ZTW1 | rna-NM_001182825.1_ZTW1 | cds-NP_014045.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:894312-895016:+ | gene-YMR314W_Sparadoxus | rna-NM_001182825.1_Sparadoxus | cds-NP_014045.1_Sparadoxus | 95.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |