Gene name: PRE2
Reference locus (S288C): YPR103W
Gene biotype: protein_coding
Description: Beta 5 subunit of the 20S proteasome; responsible for the chymotryptic activity of the proteasome; Belongs to the peptidase T1B family
Top 10 interactors (score): RPN5 (0.999); PRE7 (0.999); RPT3 (0.999); PRE4 (0.999); RPT4 (0.999); RPN6 (0.999); RPN2 (0.999); RPT1 (0.999); RPN12 (0.999); PRE3 (0.999); RPN7 (0.999); RPN9 (0.999); RPT5 (0.999); PUP1 (0.999); RPN8 (0.999); PRE6 (0.999); PUP2 (0.999); PRE9 (0.999); RPN11 (0.999); RPN10 (0.999)
Homologues (species, bitscore): PSMB5 (Homo sapiens, 284.3); Psmb8 (Mus musculus, 288.9); psmb5 (Danio rerio, 288.5); psmb5 (Xenopus tropicalis, 288.5); Prosbeta5 (Drosophila melanogaster, 273.9); pbs-5 (Caenorhabditis elegans, 196.8); AT3G26340 (Arabidopsis thaliana, 253.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:704185-705048:+ | gene-YPR103W_AKU4011 | rna-NM_001184200.1_AKU4011 | cds-NP_015428.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:192795-193658:- | gene-YPR103W_BG1 | rna-NM_001184200.1_BG1 | cds-NP_015428.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:782194-783057:+ | gene-YPR103W_Bruggeman | rna-NM_001184200.1_Bruggeman | cds-NP_015428.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:826494-827357:+ | gene-YPR103W_CAT1 | rna-NM_001184200.1_CAT1 | cds-NP_015428.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:708442-709305:+ | gene-YPR103W_CBS1585 | rna-NM_001184200.1_CBS1585 | cds-NP_015428.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:722736-723599:+ | gene-YPR103W_CBS436 | rna-NM_001184200.1_CBS436 | cds-NP_015428.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:710678-711541:+ | gene-YPR103W_CBS6412 | rna-NM_001184200.1_CBS6412 | cds-NP_015428.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:705399-706262:+ | gene-YPR103W_CBS6413 | rna-NM_001184200.1_CBS6413 | cds-NP_015428.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:732327-733190:+ | gene-YPR103W_CENPK1137D | rna-NM_001184200.1_CENPK1137D | cds-NP_015428.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:1030799-1031662:+ | gene-YPR103W_EthanolRed | rna-NM_001184200.1_EthanolRed | cds-NP_015428.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:710346-711209:+ | gene-YPR103W_FaliES1 | rna-NM_001184200.1_FaliES1 | cds-NP_015428.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000436.1:1105-1968:+ | gene-YPR103W_JAY291 | rna-NM_001184200.1_JAY291 | cds-NP_015428.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:723452-724315:+ | gene-YPR103W_MUCL30387 | rna-NM_001184200.1_MUCL30387 | cds-NP_015428.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:722142-723005:+ | gene-YPR103W_MUCL30388 | rna-NM_001184200.1_MUCL30388 | cds-NP_015428.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:700949-701812:+ | gene-YPR103W_MUCL39482 | rna-NM_001184200.1_MUCL39482 | cds-NP_015428.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:764044-764907:+ | gene-YPR103W_MUCL42920 | rna-NM_001184200.1_MUCL42920 | cds-NP_015428.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:732332-733195:+ | gene-YPR103W_NCIM3186 | rna-NM_001184200.1_NCIM3186 | cds-NP_015428.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:709543-710406:+ | gene-YPR103W_NCYC1407 | rna-NM_001184200.1_NCYC1407 | cds-NP_015428.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:715780-716643:+ | gene-YPR103W_PE2H3 | rna-NM_001184200.1_PE2H3 | cds-NP_015428.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:715428-716291:+ | gene-YPR103W_PE2H4 | rna-NM_001184200.1_PE2H4 | cds-NP_015428.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:732349-733212:+ | gene-YPR103W_S288C | rna-NM_001184200.1_S288C | cds-NP_015428.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000028.1:30468-31331:+ | gene-YPR103W_SA1 | rna-NM_001184200.1_SA1 | cds-NP_015428.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:709791-710654:+ | gene-YPR103W_ThermosaccDry | rna-NM_001184200.1_ThermosaccDry | cds-NP_015428.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:726447-727310:+ | gene-YPR103W_VR1 | rna-NM_001184200.1_VR1 | cds-NP_015428.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:708841-709704:+ | gene-YPR103W_ZTW1 | rna-NM_001184200.1_ZTW1 | cds-NP_015428.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:709806-710669:+ | gene-YPR103W_Sparadoxus | rna-NM_001184200.1_Sparadoxus | cds-NP_015428.1_Sparadoxus | 92.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |