Gene name: PRC1
Reference locus (S288C): YMR297W
Gene biotype: protein_coding
Description: Cathepsin a (carboxypeptidase c); Vacuolar carboxypeptidase Y (proteinase C, CPY); broad-specificity C-terminal exopeptidase involved in non-specific protein degradation in the vacuole; member of the serine carboxypeptidase family
Top 10 interactors (score): PEP4 (0.998); TFS1 (0.996); PEP1 (0.995); KAR2 (0.98); YOS9 (0.961); HRD1 (0.956); PRB1 (0.948); GTT1 (0.939); HRD3 (0.933); DER1 (0.929); CPS1 (0.925); GTT2 (0.919); URE2 (0.919); PNG1 (0.917); KEX2 (0.915); SEC61 (0.914); ECM4 (0.913); GTO1 (0.904); GTT3 (0.9); PEP12 (0.892)
Homologues (species, bitscore): CTSA (Homo sapiens, 179.9); Ctsa (Mus musculus, 186.4); cpvl (Danio rerio, 143.7); ctsa (Xenopus tropicalis, 172.6); CG4572 (Drosophila melanogaster, 134.0); F13D12.6 (Caenorhabditis elegans, 161.8); scpl47 (Arabidopsis thaliana, 250.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:900970-902568:+ | gene-YMR297W_AKU4011 | rna-NM_001182806.1_AKU4011 | cds-NP_014026.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:51138-52736:- | gene-YMR297W_BG1 | rna-NM_001182806.1_BG1 | cds-NP_014026.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:846179-847777:+ | gene-YMR297W_Bruggeman | rna-NM_001182806.1_Bruggeman | cds-NP_014026.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:849463-851061:+ | gene-YMR297W_CAT1 | rna-NM_001182806.1_CAT1 | cds-NP_014026.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:833221-834819:+ | gene-YMR297W_CBS1585 | rna-NM_001182806.1_CBS1585 | cds-NP_014026.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:855534-857132:+ | gene-YMR297W_CBS436 | rna-NM_001182806.1_CBS436 | cds-NP_014026.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:944796-946394:+ | gene-YMR297W_CBS6412 | rna-NM_001182806.1_CBS6412 | cds-NP_014026.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:832340-833938:+ | gene-YMR297W_CBS6413 | rna-NM_001182806.1_CBS6413 | cds-NP_014026.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:856459-858057:+ | gene-YMR297W_CENPK1137D | rna-NM_001182806.1_CENPK1137D | cds-NP_014026.1_CENPK1137D | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:893660-895258:+ | gene-YMR297W_EthanolRed | rna-NM_001182806.1_EthanolRed | cds-NP_014026.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:839687-841285:+ | gene-YMR297W_FaliES1 | rna-NM_001182806.1_FaliES1 | cds-NP_014026.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000262.1:10446-12044:- | gene-YMR297W_JAY291 | rna-NM_001182806.1_JAY291 | cds-NP_014026.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:840003-841601:+ | gene-YMR297W_MUCL30387 | rna-NM_001182806.1_MUCL30387 | cds-NP_014026.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:849397-850995:+ | gene-YMR297W_MUCL30388 | rna-NM_001182806.1_MUCL30388 | cds-NP_014026.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:834286-835884:+ | gene-YMR297W_MUCL39482 | rna-NM_001182806.1_MUCL39482 | cds-NP_014026.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:843112-844710:+ | gene-YMR297W_MUCL42920 | rna-NM_001182806.1_MUCL42920 | cds-NP_014026.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:861876-863474:+ | gene-YMR297W_NCIM3186 | rna-NM_001182806.1_NCIM3186 | cds-NP_014026.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:833940-835538:+ | gene-YMR297W_NCYC1407 | rna-NM_001182806.1_NCYC1407 | cds-NP_014026.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:849759-851357:+ | gene-YMR297W_PE2H3 | rna-NM_001182806.1_PE2H3 | cds-NP_014026.1_PE2H3 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:845732-847330:+ | gene-YMR297W_PE2H4 | rna-NM_001182806.1_PE2H4 | cds-NP_014026.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:861922-863520:+ | gene-YMR297W_S288C | rna-NM_001182806.1_S288C | cds-NP_014026.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000036.1:39716-41314:+ | gene-YMR297W_SA1 | rna-NM_001182806.1_SA1 | cds-NP_014026.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:835855-837453:+ | gene-YMR297W_ThermosaccDry | rna-NM_001182806.1_ThermosaccDry | cds-NP_014026.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:849612-851210:+ | gene-YMR297W_VR1 | rna-NM_001182806.1_VR1 | cds-NP_014026.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:251093-252691:+ | gene-YMR297W_ZTW1 | rna-NM_001182806.1_ZTW1 | cds-NP_014026.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:854479-856077:+ | gene-YMR297W_Sparadoxus | rna-NM_001182806.1_Sparadoxus | cds-NP_014026.1_Sparadoxus | 91.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |