Gene name: PPR1
Reference locus (S288C): YLR014C
Gene biotype: protein_coding
Description: Pyrimidine pathway regulatory protein 1; Zinc finger transcription factor; contains a Zn(2)-Cys(6) binuclear cluster domain, positively regulates transcription of URA1, URA3, URA4, and URA10, which are involved in de novo pyrimidine biosynthesis, in response to pyrimidine starvation; activity may be modulated by interaction with Tup1p
Top 10 interactors (score): URA4 (0.994); URA5 (0.988); URA1 (0.98); URA2 (0.917); URA10 (0.916); URA3 (0.909); PML39 (0.872); BRE2 (0.759); GAL4 (0.745); LEU3 (0.741); IML2 (0.684); MCH5 (0.626); AIM18 (0.618); SIR3 (0.594); YPR089W (0.582); AZF1 (0.582); GAT1 (0.569); CTS2 (0.566); YER039C-A (0.564); UGA3 (0.562)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:160203-162917:- | gene-YLR014C_AKU4011 | rna-NM_001181901.1_AKU4011 | cds-NP_013114.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:123478-126192:- | gene-YLR014C_BG1 | rna-NM_001181901.1_BG1 | cds-NP_013114.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:170604-173318:- | gene-YLR014C_Bruggeman | rna-NM_001181901.1_Bruggeman | cds-NP_013114.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:170924-173638:- | gene-YLR014C_CAT1 | rna-NM_001181901.1_CAT1 | cds-NP_013114.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:167831-170545:- | gene-YLR014C_CBS1585 | rna-NM_001181901.1_CBS1585 | cds-NP_013114.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:158465-161179:- | gene-YLR014C_CBS436 | rna-NM_001181901.1_CBS436 | cds-NP_013114.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:166292-168952:- | gene-YLR014C_CBS6412 | rna-NM_001181901.1_CBS6412 | cds-NP_013114.1_CBS6412 | 96.4 | 97.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:168092-170806:- | gene-YLR014C_CBS6413 | rna-NM_001181901.1_CBS6413 | cds-NP_013114.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:157518-160232:- | gene-YLR014C_CENPK1137D | rna-NM_001181901.1_CENPK1137D | cds-NP_013114.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:160216-162930:- | gene-YLR014C_EthanolRed | rna-NM_001181901.1_EthanolRed | cds-NP_013114.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:159787-162501:- | gene-YLR014C_FaliES1 | rna-NM_001181901.1_FaliES1 | cds-NP_013114.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000431.1:3983-6697:- | gene-YLR014C_JAY291 | rna-NM_001181901.1_JAY291 | cds-NP_013114.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:167950-170664:- | gene-YLR014C_MUCL30387 | rna-NM_001181901.1_MUCL30387 | cds-NP_013114.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:173930-176644:- | gene-YLR014C_MUCL30388 | rna-NM_001181901.1_MUCL30388 | cds-NP_013114.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:168326-171040:- | gene-YLR014C_MUCL39482 | rna-NM_001181901.1_MUCL39482 | cds-NP_013114.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:168229-170943:- | gene-YLR014C_MUCL42920 | rna-NM_001181901.1_MUCL42920 | cds-NP_013114.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:172242-174956:- | gene-YLR014C_NCIM3186 | rna-NM_001181901.1_NCIM3186 | cds-NP_013114.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:159946-162660:- | gene-YLR014C_NCYC1407 | rna-NM_001181901.1_NCYC1407 | cds-NP_013114.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:166261-168975:- | gene-YLR014C_PE2H3 | rna-NM_001181901.1_PE2H3 | cds-NP_013114.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:166002-168716:- | gene-YLR014C_PE2H4 | rna-NM_001181901.1_PE2H4 | cds-NP_013114.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:172268-174982:- | gene-YLR014C_S288C | rna-NM_001181901.1_S288C | cds-NP_013114.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000046.1:4118-6832:- | gene-YLR014C_SA1 | rna-NM_001181901.1_SA1 | cds-NP_013114.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:160290-163004:- | gene-YLR014C_ThermosaccDry | rna-NM_001181901.1_ThermosaccDry | cds-NP_013114.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:173712-176426:- | gene-YLR014C_VR1 | rna-NM_001181901.1_VR1 | cds-NP_013114.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:159656-162370:- | gene-YLR014C_ZTW1 | rna-NM_001181901.1_ZTW1 | cds-NP_013114.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:168451-171165:- | gene-YLR014C_Sparadoxus | rna-NM_001181901.1_Sparadoxus | cds-NP_013114.1_Sparadoxus | 88.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |