PPQ1 (YPL179W)


Gene profile

Gene name: PPQ1
Reference locus (S288C): YPL179W
Gene biotype: protein_coding

Description: Serine/threonine-protein phosphatase PPQ; Protein phosphatase that regulates the mating response; negatively regulates the MAP kinase signaling cascade during mating; member of the serine/threonine phosphatase PP1 family

Top 10 interactors (score): YPI1 (0.974); SHP1 (0.915); SDS22 (0.889); SWD2 (0.837); PFS2 (0.832); SSU72 (0.831); REF2 (0.81); MPE1 (0.806); DTD1 (0.756); CMD1 (0.75); YCH1 (0.746); BMH1 (0.705); BMH2 (0.705); PTP1 (0.703); CFT2 (0.677); CFT1 (0.67); YTH1 (0.663); YSH1 (0.659); SYC1 (0.659); FIP1 (0.655)

Homologues (species, bitscore): PPP1CC (Homo sapiens, 391.3); Ppp1ca (Mus musculus, 393.7); ppp1cab (Danio rerio, 391.7); ppp1ca (Xenopus tropicalis, 390.6); Pp1-87B (Drosophila melanogaster, 391.0); gsp-1 (Caenorhabditis elegans, 394.0); TOPP1 (Arabidopsis thaliana, 377.9)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005310.1:186160-187809:+ gene-YPL179W_AKU4011 rna-NM_001183993.1_AKU4011 cds-NP_015146.1_AKU4011 99.7 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:391772-393421:+ gene-YPL179W_BG1 rna-NM_001183993.1_BG1 cds-NP_015146.1_BG1 99.8 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:212006-213655:+ gene-YPL179W_Bruggeman rna-NM_001183993.1_Bruggeman cds-NP_015146.1_Bruggeman 99.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:208349-209998:+ gene-YPL179W_CAT1 rna-NM_001183993.1_CAT1 cds-NP_015146.1_CAT1 99.8 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:190226-191875:+ gene-YPL179W_CBS1585 rna-NM_001183993.1_CBS1585 cds-NP_015146.1_CBS1585 99.6 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005358.1:204882-206531:+ gene-YPL179W_CBS436 rna-NM_001183993.1_CBS436 cds-NP_015146.1_CBS436 99.9 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005342.1:194898-196547:+ gene-YPL179W_CBS6412 rna-NM_001183993.1_CBS6412 cds-NP_015146.1_CBS6412 99.7 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:186378-188027:+ gene-YPL179W_CBS6413 rna-NM_001183993.1_CBS6413 cds-NP_015146.1_CBS6413 99.7 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:208039-209688:+ gene-YPL179W_CENPK1137D rna-NM_001183993.1_CENPK1137D cds-NP_015146.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:184902-186551:+ gene-YPL179W_EthanolRed rna-NM_001183993.1_EthanolRed cds-NP_015146.1_EthanolRed 99.6 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005550.1:192494-194143:+ gene-YPL179W_FaliES1 rna-NM_001183993.1_FaliES1 cds-NP_015146.1_FaliES1 99.6 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000007.1:171758-173407:- gene-YPL179W_JAY291 rna-NM_001183993.1_JAY291 cds-NP_015146.1_JAY291 99.9 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:203389-205038:+ gene-YPL179W_MUCL30387 rna-NM_001183993.1_MUCL30387 cds-NP_015146.1_MUCL30387 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:201407-203056:+ gene-YPL179W_MUCL30388 rna-NM_001183993.1_MUCL30388 cds-NP_015146.1_MUCL30388 99.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:183555-185204:+ gene-YPL179W_MUCL39482 rna-NM_001183993.1_MUCL39482 cds-NP_015146.1_MUCL39482 99.6 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:240235-241884:+ gene-YPL179W_MUCL42920 rna-NM_001183993.1_MUCL42920 cds-NP_015146.1_MUCL42920 99.7 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:208140-209789:+ gene-YPL179W_NCIM3186 rna-NM_001183993.1_NCIM3186 cds-NP_015146.1_NCIM3186 99.6 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:190009-191658:+ gene-YPL179W_NCYC1407 rna-NM_001183993.1_NCYC1407 cds-NP_015146.1_NCYC1407 99.7 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:197449-199098:+ gene-YPL179W_PE2H3 rna-NM_001183993.1_PE2H3 cds-NP_015146.1_PE2H3 99.9 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:197092-198741:+ gene-YPL179W_PE2H4 rna-NM_001183993.1_PE2H4 cds-NP_015146.1_PE2H4 99.9 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:208157-209806:+ gene-YPL179W_S288C rna-NM_001183993.1_S288C cds-NP_015146.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000012.1:163540-165189:- gene-YPL179W_SA1 rna-NM_001183993.1_SA1 cds-NP_015146.1_SA1 99.6 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:192292-193941:+ gene-YPL179W_ThermosaccDry rna-NM_001183993.1_ThermosaccDry cds-NP_015146.1_ThermosaccDry 99.6 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:207222-208871:+ gene-YPL179W_VR1 rna-NM_001183993.1_VR1 cds-NP_015146.1_VR1 99.9 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000033.1:191621-193270:+ gene-YPL179W_ZTW1 rna-NM_001183993.1_ZTW1 cds-NP_015146.1_ZTW1 99.6 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:193250-194902:+ gene-YPL179W_Sparadoxus rna-NM_001183993.1_Sparadoxus cds-NP_015146.1_Sparadoxus 91.6 100.0 Verified 1 1 1 False True False False False

Additional files