Gene name: PPE1
Reference locus (S288C): YHR075C
Gene biotype: protein_coding
Description: Protein phosphatase methylesterase 1; Protein with carboxyl methyl esterase activity; may have a role in demethylation of the phosphoprotein phosphatase catalytic subunit; also identified as a small subunit mitochondrial ribosomal protein; Belongs to the AB hydrolase superfamily
Top 10 interactors (score): PPH22 (0.996); PPH21 (0.996); TPD3 (0.994); RRD1 (0.975); RRD2 (0.975); RSM22 (0.968); MRP17 (0.965); MRPS8 (0.961); MRPS16 (0.943); MRPS17 (0.942); RSM26 (0.923); MRP1 (0.922); MRPS35 (0.918); PPM1 (0.916); NAM9 (0.91); RSM23 (0.909); MRP51 (0.908); MRPS5 (0.908); MRP21 (0.908); PET123 (0.907)
Homologues (species, bitscore): PPME1 (Homo sapiens, 141.7); Ppme1 (Mus musculus, 149.4); ppme1 (Danio rerio, 137.9); ppme1 (Xenopus tropicalis, 142.5); CG5068 (Drosophila melanogaster, 127.9); B0464.9 (Caenorhabditis elegans, 167.9); AT4G10050 (Arabidopsis thaliana, 144.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:234859-236061:- | gene-YHR075C_AKU4011 | rna-NM_001179205.1_AKU4011 | cds-NP_011942.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000053.1:155206-156408:- | gene-YHR075C_BG1 | rna-NM_001179205.1_BG1 | cds-NP_011942.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:242686-243888:- | gene-YHR075C_Bruggeman | rna-NM_001179205.1_Bruggeman | cds-NP_011942.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:237331-238533:- | gene-YHR075C_CAT1 | rna-NM_001179205.1_CAT1 | cds-NP_011942.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:233900-235102:- | gene-YHR075C_CBS1585 | rna-NM_001179205.1_CBS1585 | cds-NP_011942.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:231759-232961:- | gene-YHR075C_CBS436 | rna-NM_001179205.1_CBS436 | cds-NP_011942.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:237245-238447:- | gene-YHR075C_CBS6412 | rna-NM_001179205.1_CBS6412 | cds-NP_011942.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:234940-236142:- | gene-YHR075C_CBS6413 | rna-NM_001179205.1_CBS6413 | cds-NP_011942.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:241609-242811:- | gene-YHR075C_CENPK1137D | rna-NM_001179205.1_CENPK1137D | cds-NP_011942.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:294457-295659:- | gene-YHR075C_EthanolRed | rna-NM_001179205.1_EthanolRed | cds-NP_011942.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:235261-236463:- | gene-YHR075C_FaliES1 | rna-NM_001179205.1_FaliES1 | cds-NP_011942.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000394.1:18001-19203:- | gene-YHR075C_JAY291 | rna-NM_001179205.1_JAY291 | cds-NP_011942.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:242196-243398:- | gene-YHR075C_MUCL30387 | rna-NM_001179205.1_MUCL30387 | cds-NP_011942.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:242064-243266:- | gene-YHR075C_MUCL30388 | rna-NM_001179205.1_MUCL30388 | cds-NP_011942.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:234224-235426:- | gene-YHR075C_MUCL39482 | rna-NM_001179205.1_MUCL39482 | cds-NP_011942.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:240963-242165:- | gene-YHR075C_MUCL42920 | rna-NM_001179205.1_MUCL42920 | cds-NP_011942.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:248321-249523:- | gene-YHR075C_NCIM3186 | rna-NM_001179205.1_NCIM3186 | cds-NP_011942.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:236688-237890:- | gene-YHR075C_NCYC1407 | rna-NM_001179205.1_NCYC1407 | cds-NP_011942.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:236365-237567:- | gene-YHR075C_PE2H3 | rna-NM_001179205.1_PE2H3 | cds-NP_011942.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:243812-245014:- | gene-YHR075C_PE2H4 | rna-NM_001179205.1_PE2H4 | cds-NP_011942.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:248439-249641:- | gene-YHR075C_S288C | rna-NM_001179205.1_S288C | cds-NP_011942.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000014.1:109342-110544:+ | gene-YHR075C_SA1 | rna-NM_001179205.1_SA1 | cds-NP_011942.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:236352-237554:- | gene-YHR075C_ThermosaccDry | rna-NM_001179205.1_ThermosaccDry | cds-NP_011942.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:243991-245193:- | gene-YHR075C_VR1 | rna-NM_001179205.1_VR1 | cds-NP_011942.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:227903-229105:- | gene-YHR075C_ZTW1 | rna-NM_001179205.1_ZTW1 | cds-NP_011942.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:233728-234927:- | gene-YHR075C_Sparadoxus | rna-NM_001179205.1_Sparadoxus | cds-NP_011942.1_Sparadoxus | 89.4 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |