POX1 (YGL205W)


Gene profile

Gene name: POX1
Reference locus (S288C): YGL205W
Gene biotype: protein_coding

Description: Fatty-acyl coenzyme A oxidase; involved in the fatty acid beta-oxidation pathway; localized to the peroxisomal matrix

Top 10 interactors (score): POT1 (0.999); FOX2 (0.999); FAA2 (0.999); ECI1 (0.997); SPS19 (0.994); TES1 (0.991); FAA1 (0.99); CTT1 (0.989); CAT2 (0.989); AIM45 (0.987); PEX5 (0.986); ERG10 (0.985); CTA1 (0.985); FAA4 (0.984); ACS1 (0.984); CIR1 (0.981); FAT1 (0.975); DCI1 (0.975); ALD4 (0.968); IDP2 (0.965)

Homologues (species, bitscore): ACOX1 (Homo sapiens, 285.4); Acox1 (Mus musculus, 281.6); acox1 (Danio rerio, 269.2); acox1 (Xenopus tropicalis, 294.3); CG17544 (Drosophila melanogaster, 242.3); F59F4.1 (Caenorhabditis elegans, 248.8); ACX1 (Arabidopsis thaliana, 280.8)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:109493-111739:+ gene-YGL205W_AKU4011 rna-NM_001181070.1_AKU4011 cds-NP_011310.1_AKU4011 99.6 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000175.1:102570-104816:+ gene-YGL205W_BG1 rna-NM_001181070.1_BG1 cds-NP_011310.1_BG1 99.2 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:110883-113129:+ gene-YGL205W_Bruggeman rna-NM_001181070.1_Bruggeman cds-NP_011310.1_Bruggeman 99.8 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:108681-110927:+ gene-YGL205W_CAT1 rna-NM_001181070.1_CAT1 cds-NP_011310.1_CAT1 99.2 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:113814-116060:+ gene-YGL205W_CBS1585 rna-NM_001181070.1_CBS1585 cds-NP_011310.1_CBS1585 99.6 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005349.1:109379-111625:+ gene-YGL205W_CBS436 rna-NM_001181070.1_CBS436 cds-NP_011310.1_CBS436 99.3 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:100945-103191:+ gene-YGL205W_CBS6412 rna-NM_001181070.1_CBS6412 cds-NP_011310.1_CBS6412 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:107649-109895:+ gene-YGL205W_CBS6413 rna-NM_001181070.1_CBS6413 cds-NP_011310.1_CBS6413 99.6 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:108191-110437:+ gene-YGL205W_CENPK1137D rna-NM_001181070.1_CENPK1137D cds-NP_011310.1_CENPK1137D 99.2 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:100314-102560:+ gene-YGL205W_EthanolRed rna-NM_001181070.1_EthanolRed cds-NP_011310.1_EthanolRed 99.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:101157-103403:+ gene-YGL205W_FaliES1 rna-NM_001181070.1_FaliES1 cds-NP_011310.1_FaliES1 99.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000397.1:27558-29804:+ gene-YGL205W_JAY291 rna-NM_001181070.1_JAY291 cds-NP_011310.1_JAY291 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:109928-112174:+ gene-YGL205W_MUCL30387 rna-NM_001181070.1_MUCL30387 cds-NP_011310.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:112111-114357:+ gene-YGL205W_MUCL30388 rna-NM_001181070.1_MUCL30388 cds-NP_011310.1_MUCL30388 99.8 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:110327-112573:+ gene-YGL205W_MUCL39482 rna-NM_001181070.1_MUCL39482 cds-NP_011310.1_MUCL39482 99.6 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:113432-115678:+ gene-YGL205W_MUCL42920 rna-NM_001181070.1_MUCL42920 cds-NP_011310.1_MUCL42920 99.5 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:108158-110404:+ gene-YGL205W_NCIM3186 rna-NM_001181070.1_NCIM3186 cds-NP_011310.1_NCIM3186 99.5 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:102049-104295:+ gene-YGL205W_NCYC1407 rna-NM_001181070.1_NCYC1407 cds-NP_011310.1_NCYC1407 99.6 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:104875-107121:+ gene-YGL205W_PE2H3 rna-NM_001181070.1_PE2H3 cds-NP_011310.1_PE2H3 99.2 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:104423-106669:+ gene-YGL205W_PE2H4 rna-NM_001181070.1_PE2H4 cds-NP_011310.1_PE2H4 99.2 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:108158-110404:+ gene-YGL205W_S288C rna-NM_001181070.1_S288C cds-NP_011310.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000002.1:264874-267120:- gene-YGL205W_SA1 rna-NM_001181070.1_SA1 cds-NP_011310.1_SA1 99.2 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:101418-103664:+ gene-YGL205W_ThermosaccDry rna-NM_001181070.1_ThermosaccDry cds-NP_011310.1_ThermosaccDry 99.6 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:109290-111536:+ gene-YGL205W_VR1 rna-NM_001181070.1_VR1 cds-NP_011310.1_VR1 99.2 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000014.1:100454-102700:+ gene-YGL205W_ZTW1 rna-NM_001181070.1_ZTW1 cds-NP_011310.1_ZTW1 99.6 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:107662-109911:+ gene-YGL205W_Sparadoxus rna-NM_001181070.1_Sparadoxus cds-NP_011310.1_Sparadoxus 89.4 100.0 Verified 1 1 1 False True False False False

Additional files