Gene name: POP7
Reference locus (S288C): YBR167C
Gene biotype: protein_coding
Description: Ribonucleases P/MRP protein subunit POP7; Subunit of RNase MRP, nuclear RNase P and telomerase; forms a soluble heterodimer with Pop6p that binds P3 domain of RNase MRP and RNase P RNAs; RNase MRP cleaves pre-rRNA, nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs, while telomerase replenishes telomeric DNA
Top 10 interactors (score): POP8 (0.999); POP3 (0.999); RMP1 (0.999); POP4 (0.999); RPP1 (0.999); POP6 (0.999); POP5 (0.999); POP1 (0.999); RPR2 (0.998); RPM2 (0.979); SNM1 (0.971); EST1 (0.946); EST3 (0.928); NOP1 (0.913); NOP56 (0.91); RRP9 (0.908); EST2 (0.904); NOP58 (0.903); SNU13 (0.902); LCP5 (0.9)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:554341-554763:- | gene-YBR167C_AKU4011 | rna-NM_001178515.3_AKU4011 | cds-NP_009726.3_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:544852-545274:- | gene-YBR167C_BG1 | rna-NM_001178515.3_BG1 | cds-NP_009726.3_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:557363-557785:- | gene-YBR167C_Bruggeman | rna-NM_001178515.3_Bruggeman | cds-NP_009726.3_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:451479-451901:- | gene-YBR167C_CAT1 | rna-NM_001178515.3_CAT1 | cds-NP_009726.3_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:546123-546545:- | gene-YBR167C_CBS1585 | rna-NM_001178515.3_CBS1585 | cds-NP_009726.3_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:554206-554628:- | gene-YBR167C_CBS436 | rna-NM_001178515.3_CBS436 | cds-NP_009726.3_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:643607-644029:- | gene-YBR167C_CBS6412 | rna-NM_001178515.3_CBS6412 | cds-NP_009726.3_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:551678-552100:- | gene-YBR167C_CBS6413 | rna-NM_001178515.3_CBS6413 | cds-NP_009726.3_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:565268-565690:- | gene-YBR167C_CENPK1137D | rna-NM_001178515.3_CENPK1137D | cds-NP_009726.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:680186-680608:- | gene-YBR167C_EthanolRed | rna-NM_001178515.3_EthanolRed | cds-NP_009726.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:570418-570840:- | gene-YBR167C_FaliES1 | rna-NM_001178515.3_FaliES1 | cds-NP_009726.3_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000310.1:10250-10672:- | gene-YBR167C_JAY291 | rna-NM_001178515.3_JAY291 | cds-NP_009726.3_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:559016-559438:- | gene-YBR167C_MUCL30387 | rna-NM_001178515.3_MUCL30387 | cds-NP_009726.3_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:558302-558724:- | gene-YBR167C_MUCL30388 | rna-NM_001178515.3_MUCL30388 | cds-NP_009726.3_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:544496-544918:- | gene-YBR167C_MUCL39482 | rna-NM_001178515.3_MUCL39482 | cds-NP_009726.3_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:554417-554839:- | gene-YBR167C_MUCL42920 | rna-NM_001178515.3_MUCL42920 | cds-NP_009726.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:571265-571687:- | gene-YBR167C_NCIM3186 | rna-NM_001178515.3_NCIM3186 | cds-NP_009726.3_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:547065-547487:- | gene-YBR167C_NCYC1407 | rna-NM_001178515.3_NCYC1407 | cds-NP_009726.3_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:559724-560146:- | gene-YBR167C_PE2H3 | rna-NM_001178515.3_PE2H3 | cds-NP_009726.3_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:557400-557822:- | gene-YBR167C_PE2H4 | rna-NM_001178515.3_PE2H4 | cds-NP_009726.3_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:571468-571890:- | gene-YBR167C_S288C | rna-NM_001178515.3_S288C | cds-NP_009726.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000032.1:92716-93138:- | gene-YBR167C_SA1 | rna-NM_001178515.3_SA1 | cds-NP_009726.3_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:569428-569850:- | gene-YBR167C_ThermosaccDry | rna-NM_001178515.3_ThermosaccDry | cds-NP_009726.3_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:550875-551297:- | gene-YBR167C_VR1 | rna-NM_001178515.3_VR1 | cds-NP_009726.3_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:544543-544965:- | gene-YBR167C_ZTW1 | rna-NM_001178515.3_ZTW1 | cds-NP_009726.3_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:581898-582320:- | gene-YBR167C_Sparadoxus | rna-NM_001178515.3_Sparadoxus | cds-NP_009726.3_Sparadoxus | 86.5 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |