Gene name: POM152
Reference locus (S288C): YMR129W
Gene biotype: protein_coding
Description: Nucleoporin POM152; Glycoprotein subunit of transmembrane ring of nuclear pore complex; contributes to nucleocytoplasmic transport, nuclear pore complex (NPC) biogenesis and spindle pole body duplication; homologous to human NUP210
Top 10 interactors (score): POM34 (0.998); NUP170 (0.997); NIC96 (0.995); NDC1 (0.994); ASM4 (0.994); NUP188 (0.992); NUP157 (0.99); NUP192 (0.974); NUP133 (0.97); NUP1 (0.965); NUP53 (0.961); NUP159 (0.953); POM33 (0.952); NUP49 (0.95); GLE2 (0.93); NUP85 (0.926); NUP57 (0.925); NUP145 (0.922); GLE1 (0.922); MPS3 (0.921)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:567304-571317:+ | gene-YMR129W_AKU4011 | rna-NM_001182630.1_AKU4011 | cds-NP_013848.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000068.1:101217-105230:- | gene-YMR129W_BG1 | rna-NM_001182630.1_BG1 | cds-NP_013848.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:510484-514497:+ | gene-YMR129W_Bruggeman | rna-NM_001182630.1_Bruggeman | cds-NP_013848.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:512698-516711:+ | gene-YMR129W_CAT1 | rna-NM_001182630.1_CAT1 | cds-NP_013848.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:500227-504240:+ | gene-YMR129W_CBS1585 | rna-NM_001182630.1_CBS1585 | cds-NP_013848.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:504099-508112:+ | gene-YMR129W_CBS436 | rna-NM_001182630.1_CBS436 | cds-NP_013848.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:613220-617233:+ | gene-YMR129W_CBS6412 | rna-NM_001182630.1_CBS6412 | cds-NP_013848.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:498787-502800:+ | gene-YMR129W_CBS6413 | rna-NM_001182630.1_CBS6413 | cds-NP_013848.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:522318-526331:+ | gene-YMR129W_CENPK1137D | rna-NM_001182630.1_CENPK1137D | cds-NP_013848.1_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:498416-502429:+ | gene-YMR129W_EthanolRed | rna-NM_001182630.1_EthanolRed | cds-NP_013848.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:504357-508370:+ | gene-YMR129W_FaliES1 | rna-NM_001182630.1_FaliES1 | cds-NP_013848.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000294.1:18620-22633:- | gene-YMR129W_JAY291 | rna-NM_001182630.1_JAY291 | cds-NP_013848.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:505209-509222:+ | gene-YMR129W_MUCL30387 | rna-NM_001182630.1_MUCL30387 | cds-NP_013848.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:510736-514749:+ | gene-YMR129W_MUCL30388 | rna-NM_001182630.1_MUCL30388 | cds-NP_013848.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:500928-504941:+ | gene-YMR129W_MUCL39482 | rna-NM_001182630.1_MUCL39482 | cds-NP_013848.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:507222-511235:+ | gene-YMR129W_MUCL42920 | rna-NM_001182630.1_MUCL42920 | cds-NP_013848.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:527758-531771:+ | gene-YMR129W_NCIM3186 | rna-NM_001182630.1_NCIM3186 | cds-NP_013848.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:500566-504579:+ | gene-YMR129W_NCYC1407 | rna-NM_001182630.1_NCYC1407 | cds-NP_013848.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:511001-515014:+ | gene-YMR129W_PE2H3 | rna-NM_001182630.1_PE2H3 | cds-NP_013848.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:511455-515468:+ | gene-YMR129W_PE2H4 | rna-NM_001182630.1_PE2H4 | cds-NP_013848.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:527804-531817:+ | gene-YMR129W_S288C | rna-NM_001182630.1_S288C | cds-NP_013848.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000048.1:39458-43471:- | gene-YMR129W_SA1 | rna-NM_001182630.1_SA1 | cds-NP_013848.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:500814-504827:+ | gene-YMR129W_ThermosaccDry | rna-NM_001182630.1_ThermosaccDry | cds-NP_013848.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:513503-517516:+ | gene-YMR129W_VR1 | rna-NM_001182630.1_VR1 | cds-NP_013848.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:475959-479972:+ | gene-YMR129W_ZTW1 | rna-NM_001182630.1_ZTW1 | cds-NP_013848.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:512307-516320:+ | gene-YMR129W_Sparadoxus | rna-NM_001182630.1_Sparadoxus | cds-NP_013848.1_Sparadoxus | 89.8 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |