Gene name: POL5
Reference locus (S288C): YEL055C
Gene biotype: protein_coding
Description: DNA Polymerase phi; has sequence similarity to the human MybBP1A and weak sequence similarity to B-type DNA polymerases, not required for chromosomal DNA replication; required for the synthesis of rRNA
Top 10 interactors (score): KRR1 (0.999); UTP10 (0.997); UTP5 (0.995); UTP4 (0.995); NAN1 (0.994); PWP1 (0.99); NUG1 (0.989); PWP2 (0.988); UTP15 (0.985); RPA135 (0.979); RRP5 (0.978); MTR4 (0.978); ERB1 (0.978); UTP8 (0.977); UTP18 (0.974); NOP58 (0.974); NOC2 (0.97); NOP2 (0.97); ENP2 (0.97); KRE33 (0.97)
Homologues (species, bitscore): MYBBP1A (Homo sapiens, 65.9); Mybbp1a (Mus musculus, 65.1); K04C2.2 (Caenorhabditis elegans, 52.0); AT5G64420 (Arabidopsis thaliana, 73.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:42876-45944:- | gene-YEL055C_AKU4011 | rna-NM_001178870.1_AKU4011 | cds-NP_010859.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000075.1:34570-37638:+ | gene-YEL055C_BG1 | rna-NM_001178870.1_BG1 | cds-NP_010859.1_BG1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:46390-49464:- | gene-YEL055C_Bruggeman | rna-NM_001178870.1_Bruggeman | cds-NP_010859.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:44821-47889:- | gene-YEL055C_CAT1 | rna-NM_001178870.1_CAT1 | cds-NP_010859.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:42823-45891:- | gene-YEL055C_CBS1585 | rna-NM_001178870.1_CBS1585 | cds-NP_010859.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:43878-46952:- | gene-YEL055C_CBS436 | rna-NM_001178870.1_CBS436 | cds-NP_010859.1_CBS436 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:43075-46143:- | gene-YEL055C_CBS6412 | rna-NM_001178870.1_CBS6412 | cds-NP_010859.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:47717-50785:- | gene-YEL055C_CBS6413 | rna-NM_001178870.1_CBS6413 | cds-NP_010859.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:46311-49379:- | gene-YEL055C_CENPK1137D | rna-NM_001178870.1_CENPK1137D | cds-NP_010859.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:42634-45702:- | gene-YEL055C_EthanolRed | rna-NM_001178870.1_EthanolRed | cds-NP_010859.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:42897-45965:- | gene-YEL055C_FaliES1 | rna-NM_001178870.1_FaliES1 | cds-NP_010859.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000427.1:12089-15157:+ | gene-YEL055C_JAY291 | rna-NM_001178870.1_JAY291 | cds-NP_010859.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:46829-49897:- | gene-YEL055C_MUCL30387 | rna-NM_001178870.1_MUCL30387 | cds-NP_010859.1_MUCL30387 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:42940-46014:- | gene-YEL055C_MUCL30388 | rna-NM_001178870.1_MUCL30388 | cds-NP_010859.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:42190-45258:- | gene-YEL055C_MUCL39482 | rna-NM_001178870.1_MUCL39482 | cds-NP_010859.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:46824-49898:- | gene-YEL055C_MUCL42920 | rna-NM_001178870.1_MUCL42920 | cds-NP_010859.1_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:48470-51538:- | gene-YEL055C_NCIM3186 | rna-NM_001178870.1_NCIM3186 | cds-NP_010859.1_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:47285-50353:- | gene-YEL055C_NCYC1407 | rna-NM_001178870.1_NCYC1407 | cds-NP_010859.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:51299-54367:- | gene-YEL055C_PE2H3 | rna-NM_001178870.1_PE2H3 | cds-NP_010859.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:47209-50283:- | gene-YEL055C_PE2H4 | rna-NM_001178870.1_PE2H4 | cds-NP_010859.1_PE2H4 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:48471-51539:- | gene-YEL055C_S288C | rna-NM_001178870.1_S288C | cds-NP_010859.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000053.1:35451-38519:+ | gene-YEL055C_SA1 | rna-NM_001178870.1_SA1 | cds-NP_010859.1_SA1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:43297-46365:- | gene-YEL055C_ThermosaccDry | rna-NM_001178870.1_ThermosaccDry | cds-NP_010859.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:42501-45575:- | gene-YEL055C_VR1 | rna-NM_001178870.1_VR1 | cds-NP_010859.1_VR1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:42235-45303:- | gene-YEL055C_ZTW1 | rna-NM_001178870.1_ZTW1 | cds-NP_010859.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:46557-49619:- | gene-YEL055C_Sparadoxus | rna-NM_001178870.1_Sparadoxus | cds-NP_010859.1_Sparadoxus | 88.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |