Gene name: POL31
Reference locus (S288C): YJR006W
Gene biotype: protein_coding
Description: Subunit of DNA polymerase delta (polymerase III); essential for cell viability; involved in DNA replication and DNA repair; forms a complex with Rev3p, Rev7p and Pol32p; relocalizes to the cytosol in response to hypoxia
Top 10 interactors (score): REV7 (0.999); POL2 (0.999); RAD27 (0.999); POL1 (0.999); DPB2 (0.999); POL32 (0.999); REV3 (0.999); POL12 (0.999); POL3 (0.999); PRI2 (0.999); POL30 (0.999); DPB4 (0.998); PRI1 (0.998); RFA1 (0.997); DPB3 (0.991); CTF18 (0.984); MCM3 (0.978); MCM5 (0.974); RFC4 (0.973); RFC3 (0.973)
Homologues (species, bitscore): POLD2 (Homo sapiens, 217.2); Pold2 (Mus musculus, 222.6); pold2 (Danio rerio, 229.9); pold2 (Xenopus tropicalis, 107.5); CG12018 (Drosophila melanogaster, 203.8); F12F6.7 (Caenorhabditis elegans, 163.3); POLD2 (Arabidopsis thaliana, 216.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:432373-433836:+ | gene-YJR006W_AKU4011 | rna-NM_001181663.1_AKU4011 | cds-NP_012539.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:178891-180354:- | gene-YJR006W_BG1 | rna-NM_001181663.1_BG1 | cds-NP_012539.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:446470-447933:+ | gene-YJR006W_Bruggeman | rna-NM_001181663.1_Bruggeman | cds-NP_012539.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:450411-451874:+ | gene-YJR006W_CAT1 | rna-NM_001181663.1_CAT1 | cds-NP_012539.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:443960-445423:+ | gene-YJR006W_CBS1585 | rna-NM_001181663.1_CBS1585 | cds-NP_012539.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:462941-464404:+ | gene-YJR006W_CBS436 | rna-NM_001181663.1_CBS436 | cds-NP_012539.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:432187-433650:+ | gene-YJR006W_CBS6412 | rna-NM_001181663.1_CBS6412 | cds-NP_012539.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:434416-435879:+ | gene-YJR006W_CBS6413 | rna-NM_001181663.1_CBS6413 | cds-NP_012539.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:431627-433090:+ | gene-YJR006W_CENPK1137D | rna-NM_001181663.1_CENPK1137D | cds-NP_012539.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:437349-438812:+ | gene-YJR006W_EthanolRed | rna-NM_001181663.1_EthanolRed | cds-NP_012539.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:448490-449953:+ | gene-YJR006W_FaliES1 | rna-NM_001181663.1_FaliES1 | cds-NP_012539.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000321.1:3293-4756:- | gene-YJR006W_JAY291 | rna-NM_001181663.1_JAY291 | cds-NP_012539.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:446797-448260:+ | gene-YJR006W_MUCL30387 | rna-NM_001181663.1_MUCL30387 | cds-NP_012539.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:443319-444782:+ | gene-YJR006W_MUCL30388 | rna-NM_001181663.1_MUCL30388 | cds-NP_012539.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:437294-438757:+ | gene-YJR006W_MUCL39482 | rna-NM_001181663.1_MUCL39482 | cds-NP_012539.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:442732-444195:+ | gene-YJR006W_MUCL42920 | rna-NM_001181663.1_MUCL42920 | cds-NP_012539.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:449181-450644:+ | gene-YJR006W_NCIM3186 | rna-NM_001181663.1_NCIM3186 | cds-NP_012539.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:435186-436649:+ | gene-YJR006W_NCYC1407 | rna-NM_001181663.1_NCYC1407 | cds-NP_012539.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:453595-455058:+ | gene-YJR006W_PE2H3 | rna-NM_001181663.1_PE2H3 | cds-NP_012539.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:447289-448752:+ | gene-YJR006W_PE2H4 | rna-NM_001181663.1_PE2H4 | cds-NP_012539.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:449202-450665:+ | gene-YJR006W_S288C | rna-NM_001181663.1_S288C | cds-NP_012539.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:245213-246676:+ | gene-YJR006W_SA1 | rna-NM_001181663.1_SA1 | cds-NP_012539.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:442149-443612:+ | gene-YJR006W_ThermosaccDry | rna-NM_001181663.1_ThermosaccDry | cds-NP_012539.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:444514-445977:+ | gene-YJR006W_VR1 | rna-NM_001181663.1_VR1 | cds-NP_012539.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:422150-423613:+ | gene-YJR006W_ZTW1 | rna-NM_001181663.1_ZTW1 | cds-NP_012539.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:446999-448462:+ | gene-YJR006W_Sparadoxus | rna-NM_001181663.1_Sparadoxus | cds-NP_012539.1_Sparadoxus | 88.8 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |