Gene name: POL12
Reference locus (S288C): YBL035C
Gene biotype: protein_coding
Description: B subunit of DNA polymerase alpha-primase complex; required for initiation of DNA replication during mitotic and premeiotic DNA synthesis; also functions in telomere capping and length regulation
Top 10 interactors (score): POL31 (0.999); POL3 (0.999); PRI2 (0.999); MCM4 (0.999); CDC45 (0.999); POL1 (0.999); DPB2 (0.999); PRI1 (0.999); POL2 (0.999); RFA2 (0.998); MCM2 (0.998); MCM5 (0.997); RAD27 (0.997); MCM7 (0.997); ORC4 (0.997); RFA1 (0.997); CDC6 (0.997); POL30 (0.996); MCM3 (0.996); ORC5 (0.996)
Homologues (species, bitscore): POLA2 (Homo sapiens, 152.5); Pola2 (Mus musculus, 150.2); pola2 (Danio rerio, 157.1); pola2 (Xenopus tropicalis, 149.8); CG5923 (Drosophila melanogaster, 101.7); div-1 (Caenorhabditis elegans, 110.2); POLA2 (Arabidopsis thaliana, 144.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:145109-147226:- | gene-YBL035C_AKU4011 | rna-NM_001178275.1_AKU4011 | cds-NP_009518.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:135927-138044:- | gene-YBL035C_BG1 | rna-NM_001178275.1_BG1 | cds-NP_009518.1_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:145692-147809:- | gene-YBL035C_Bruggeman | rna-NM_001178275.1_Bruggeman | cds-NP_009518.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:148324-150441:- | gene-YBL035C_CAT1 | rna-NM_001178275.1_CAT1 | cds-NP_009518.1_CAT1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:137648-139765:- | gene-YBL035C_CBS1585 | rna-NM_001178275.1_CBS1585 | cds-NP_009518.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:146158-148275:- | gene-YBL035C_CBS436 | rna-NM_001178275.1_CBS436 | cds-NP_009518.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:236404-238521:- | gene-YBL035C_CBS6412 | rna-NM_001178275.1_CBS6412 | cds-NP_009518.1_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:143219-145336:- | gene-YBL035C_CBS6413 | rna-NM_001178275.1_CBS6413 | cds-NP_009518.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:145243-147360:- | gene-YBL035C_CENPK1137D | rna-NM_001178275.1_CENPK1137D | cds-NP_009518.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:159068-161185:- | gene-YBL035C_EthanolRed | rna-NM_001178275.1_EthanolRed | cds-NP_009518.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:159915-162032:- | gene-YBL035C_FaliES1 | rna-NM_001178275.1_FaliES1 | cds-NP_009518.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000072.1:62551-64668:- | gene-YBL035C_JAY291 | rna-NM_001178275.1_JAY291 | cds-NP_009518.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:145071-147188:- | gene-YBL035C_MUCL30387 | rna-NM_001178275.1_MUCL30387 | cds-NP_009518.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:146342-148459:- | gene-YBL035C_MUCL30388 | rna-NM_001178275.1_MUCL30388 | cds-NP_009518.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:137823-139940:- | gene-YBL035C_MUCL39482 | rna-NM_001178275.1_MUCL39482 | cds-NP_009518.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:144656-146773:- | gene-YBL035C_MUCL42920 | rna-NM_001178275.1_MUCL42920 | cds-NP_009518.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:151290-153407:- | gene-YBL035C_NCIM3186 | rna-NM_001178275.1_NCIM3186 | cds-NP_009518.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:138960-141077:- | gene-YBL035C_NCYC1407 | rna-NM_001178275.1_NCYC1407 | cds-NP_009518.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:145228-147345:- | gene-YBL035C_PE2H3 | rna-NM_001178275.1_PE2H3 | cds-NP_009518.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:142872-144989:- | gene-YBL035C_PE2H4 | rna-NM_001178275.1_PE2H4 | cds-NP_009518.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:151493-153610:- | gene-YBL035C_S288C | rna-NM_001178275.1_S288C | cds-NP_009518.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000051.1:36079-38196:- | gene-YBL035C_SA1 | rna-NM_001178275.1_SA1 | cds-NP_009518.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:159868-161985:- | gene-YBL035C_ThermosaccDry | rna-NM_001178275.1_ThermosaccDry | cds-NP_009518.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:142057-144174:- | gene-YBL035C_VR1 | rna-NM_001178275.1_VR1 | cds-NP_009518.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:136588-138705:- | gene-YBL035C_ZTW1 | rna-NM_001178275.1_ZTW1 | cds-NP_009518.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:171467-173584:- | gene-YBL035C_Sparadoxus | rna-NM_001178275.1_Sparadoxus | cds-NP_009518.1_Sparadoxus | 88.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |