Gene name: POL1
Reference locus (S288C): YNL102W
Gene biotype: protein_coding
Description: Dna-directed dna polymerase alpha catalytic subunit pol1; Catalytic subunit of the DNA polymerase I alpha-primase complex; required for the initiation of DNA replication during mitotic DNA synthesis and premeiotic DNA synthesis
Top 10 interactors (score): MCM4 (0.999); DPB2 (0.999); MCM2 (0.999); CDC45 (0.999); PRI1 (0.999); POL2 (0.999); CTF4 (0.999); POL12 (0.999); CDC13 (0.999); POL31 (0.999); PRI2 (0.999); MCM3 (0.998); MCM5 (0.998); POL30 (0.998); RFA1 (0.998); CDC6 (0.998); RAD27 (0.998); MCM6 (0.998); MCM10 (0.998); MCM7 (0.997)
Homologues (species, bitscore): POLA1 (Homo sapiens, 685.6); Pola1 (Mus musculus, 678.7); pola1 (Danio rerio, 695.7); pola1 (Xenopus tropicalis, 684.5); POLA (Drosophila melanogaster, 585.1); Y47D3A.29 (Caenorhabditis elegans, 562.8); ICU2 (Arabidopsis thaliana, 582.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:423753-428159:+ | gene-YNL102W_AKU4011 | rna-NM_001182940.3_AKU4011 | cds-NP_014297.3_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:327750-332156:+ | gene-YNL102W_BG1 | rna-NM_001182940.3_BG1 | cds-NP_014297.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:434468-438874:+ | gene-YNL102W_Bruggeman | rna-NM_001182940.3_Bruggeman | cds-NP_014297.3_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:477505-481911:+ | gene-YNL102W_CAT1 | rna-NM_001182940.3_CAT1 | cds-NP_014297.3_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:424360-428766:+ | gene-YNL102W_CBS1585 | rna-NM_001182940.3_CBS1585 | cds-NP_014297.3_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:492770-497176:+ | gene-YNL102W_CBS436 | rna-NM_001182940.3_CBS436 | cds-NP_014297.3_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:419520-423926:+ | gene-YNL102W_CBS6412 | rna-NM_001182940.3_CBS6412 | cds-NP_014297.3_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:420836-425242:+ | gene-YNL102W_CBS6413 | rna-NM_001182940.3_CBS6413 | cds-NP_014297.3_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:423937-428343:+ | gene-YNL102W_CENPK1137D | rna-NM_001182940.3_CENPK1137D | cds-NP_014297.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:420760-425166:+ | gene-YNL102W_EthanolRed | rna-NM_001182940.3_EthanolRed | cds-NP_014297.3_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:416658-421064:+ | gene-YNL102W_FaliES1 | rna-NM_001182940.3_FaliES1 | cds-NP_014297.3_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000140.1:4286-8692:+ | gene-YNL102W_JAY291 | rna-NM_001182940.3_JAY291 | cds-NP_014297.3_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:430642-435048:+ | gene-YNL102W_MUCL30387 | rna-NM_001182940.3_MUCL30387 | cds-NP_014297.3_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:466024-470430:+ | gene-YNL102W_MUCL30388 | rna-NM_001182940.3_MUCL30388 | cds-NP_014297.3_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:421761-426167:+ | gene-YNL102W_MUCL39482 | rna-NM_001182940.3_MUCL39482 | cds-NP_014297.3_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:425767-430173:+ | gene-YNL102W_MUCL42920 | rna-NM_001182940.3_MUCL42920 | cds-NP_014297.3_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:430056-434462:+ | gene-YNL102W_NCIM3186 | rna-NM_001182940.3_NCIM3186 | cds-NP_014297.3_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:423879-428285:+ | gene-YNL102W_NCYC1407 | rna-NM_001182940.3_NCYC1407 | cds-NP_014297.3_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:422797-427203:+ | gene-YNL102W_PE2H3 | rna-NM_001182940.3_PE2H3 | cds-NP_014297.3_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:422203-426609:+ | gene-YNL102W_PE2H4 | rna-NM_001182940.3_PE2H4 | cds-NP_014297.3_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:430087-434493:+ | gene-YNL102W_S288C | rna-NM_001182940.3_S288C | cds-NP_014297.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000024.1:15048-19454:+ | gene-YNL102W_SA1 | rna-NM_001182940.3_SA1 | cds-NP_014297.3_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:417532-421938:+ | gene-YNL102W_ThermosaccDry | rna-NM_001182940.3_ThermosaccDry | cds-NP_014297.3_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:436229-440635:+ | gene-YNL102W_VR1 | rna-NM_001182940.3_VR1 | cds-NP_014297.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:327339-331745:+ | gene-YNL102W_ZTW1 | rna-NM_001182940.3_ZTW1 | cds-NP_014297.3_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:428412-432815:+ | gene-YNL102W_Sparadoxus | rna-NM_001182940.3_Sparadoxus | cds-NP_014297.3_Sparadoxus | 90.9 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |