POA1 (YBR022W)


Gene profile

Gene name: POA1
Reference locus (S288C): YBR022W
Gene biotype: protein_coding

Description: Phosphatase that is highly specific for ADP-ribose 1''-phosphate; a tRNA splicing metabolite; may have a role in regulation of tRNA splicing; Belongs to the POA1 family

Top 10 interactors (score): CPD1 (0.9); YMR087W (0.813); PUF3 (0.764); ECM15 (0.749); YBR013C (0.745); YBL012C (0.745); YBR071W (0.745); YMR103C (0.745); MRP10 (0.744); YBR016W (0.716); YBL044W (0.71); YBL083C (0.697); YBR300C (0.694); RMA1 (0.694); TRI1 (0.689); PMU1 (0.679); YBR144C (0.656); TPT1 (0.643); PES4 (0.617); DIA3 (0.611)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005296.1:266166-266699:+ gene-YBR022W_AKU4011 rna-NM_001178370.1_AKU4011 cds-NP_009578.1_AKU4011 99.6 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000179.1:256318-256851:+ gene-YBR022W_BG1 rna-NM_001178370.1_BG1 cds-NP_009578.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:266898-267431:+ gene-YBR022W_Bruggeman rna-NM_001178370.1_Bruggeman cds-NP_009578.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005520.1:269194-269727:+ gene-YBR022W_CAT1 rna-NM_001178370.1_CAT1 cds-NP_009578.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005360.1:258203-258736:+ gene-YBR022W_CBS1585 rna-NM_001178370.1_CBS1585 cds-NP_009578.1_CBS1585 99.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005344.1:266472-267005:+ gene-YBR022W_CBS436 rna-NM_001178370.1_CBS436 cds-NP_009578.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:356707-357240:+ gene-YBR022W_CBS6412 rna-NM_001178370.1_CBS6412 cds-NP_009578.1_CBS6412 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005312.1:263571-264104:+ gene-YBR022W_CBS6413 rna-NM_001178370.1_CBS6413 cds-NP_009578.1_CBS6413 99.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001523.1:277486-278019:+ gene-YBR022W_CENPK1137D rna-NM_001178370.1_CENPK1137D cds-NP_009578.1_CENPK1137D 99.0 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:393178-393711:+ gene-YBR022W_EthanolRed rna-NM_001178370.1_EthanolRed cds-NP_009578.1_EthanolRed 98.8 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:281274-281807:+ gene-YBR022W_FaliES1 rna-NM_001178370.1_FaliES1 cds-NP_009578.1_FaliES1 99.0 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000048.1:15787-16320:- gene-YBR022W_JAY291 rna-NM_001178370.1_JAY291 cds-NP_009578.1_JAY291 99.8 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005408.1:267497-268030:+ gene-YBR022W_MUCL30387 rna-NM_001178370.1_MUCL30387 cds-NP_009578.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:267751-268284:+ gene-YBR022W_MUCL30388 rna-NM_001178370.1_MUCL30388 cds-NP_009578.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005280.1:258185-258718:+ gene-YBR022W_MUCL39482 rna-NM_001178370.1_MUCL39482 cds-NP_009578.1_MUCL39482 99.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005424.1:265640-266173:+ gene-YBR022W_MUCL42920 rna-NM_001178370.1_MUCL42920 cds-NP_009578.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:283535-284068:+ gene-YBR022W_NCIM3186 rna-NM_001178370.1_NCIM3186 cds-NP_009578.1_NCIM3186 98.8 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005264.1:259362-259895:+ gene-YBR022W_NCYC1407 rna-NM_001178370.1_NCYC1407 cds-NP_009578.1_NCYC1407 99.6 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:271543-272076:+ gene-YBR022W_PE2H3 rna-NM_001178370.1_PE2H3 cds-NP_009578.1_PE2H3 99.8 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999873.1:269211-269744:+ gene-YBR022W_PE2H4 rna-NM_001178370.1_PE2H4 cds-NP_009578.1_PE2H4 99.8 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:283738-284271:+ gene-YBR022W_S288C rna-NM_001178370.1_S288C cds-NP_009578.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000037.1:24433-24966:- gene-YBR022W_SA1 rna-NM_001178370.1_SA1 cds-NP_009578.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:280983-281516:+ gene-YBR022W_ThermosaccDry rna-NM_001178370.1_ThermosaccDry cds-NP_009578.1_ThermosaccDry 98.8 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005456.1:262895-263428:+ gene-YBR022W_VR1 rna-NM_001178370.1_VR1 cds-NP_009578.1_VR1 99.8 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000003.1:256962-257495:+ gene-YBR022W_ZTW1 rna-NM_001178370.1_ZTW1 cds-NP_009578.1_ZTW1 99.6 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:293145-293678:+ gene-YBR022W_Sparadoxus rna-NM_001178370.1_Sparadoxus cds-NP_009578.1_Sparadoxus 86.9 99.8 Verified 1 1 1 False True False False False

Additional files