Gene name: PNP1
Reference locus (S288C): YLR209C
Gene biotype: protein_coding
Description: Purine nucleoside phosphorylase; specifically metabolizes inosine and guanosine nucleosides; involved in the nicotinamide riboside salvage pathway; Belongs to the PNP/MTAP phosphorylase family
Top 10 interactors (score): URH1 (0.997); ISN1 (0.994); CDD1 (0.989); AAH1 (0.988); GUD1 (0.988); ADO1 (0.985); SDT1 (0.983); SIR2 (0.979); HPT1 (0.977); NPT1 (0.969); NMA1 (0.967); NMA2 (0.967); NRK1 (0.966); XPT1 (0.962); PNC1 (0.956); APT1 (0.952); APT2 (0.952); FCY1 (0.936); HST2 (0.918); HST3 (0.915)
Homologues (species, bitscore): PNP (Homo sapiens, 275.0); Pnp2 (Mus musculus, 274.6); pnp6 (Danio rerio, 250.4); pnp (Xenopus tropicalis, 243.8); CG16758 (Drosophila melanogaster, 206.8); K02D7.1 (Caenorhabditis elegans, 190.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:514950-515885:- | gene-YLR209C_AKU4011 | rna-NM_001182096.1_AKU4011 | cds-NP_013310.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000177.1:72194-73129:- | gene-YLR209C_BG1 | rna-NM_001182096.1_BG1 | cds-NP_013310.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:555174-556109:- | gene-YLR209C_Bruggeman | rna-NM_001182096.1_Bruggeman | cds-NP_013310.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:554812-555747:- | gene-YLR209C_CAT1 | rna-NM_001182096.1_CAT1 | cds-NP_013310.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:550442-551377:- | gene-YLR209C_CBS1585 | rna-NM_001182096.1_CBS1585 | cds-NP_013310.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:540636-541571:- | gene-YLR209C_CBS436 | rna-NM_001182096.1_CBS436 | cds-NP_013310.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:519004-519939:- | gene-YLR209C_CBS6412 | rna-NM_001182096.1_CBS6412 | cds-NP_013310.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:550739-551674:- | gene-YLR209C_CBS6413 | rna-NM_001182096.1_CBS6413 | cds-NP_013310.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:545442-546377:- | gene-YLR209C_CENPK1137D | rna-NM_001182096.1_CENPK1137D | cds-NP_013310.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:514452-515387:- | gene-YLR209C_EthanolRed | rna-NM_001182096.1_EthanolRed | cds-NP_013310.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:543379-544314:- | gene-YLR209C_FaliES1 | rna-NM_001182096.1_FaliES1 | cds-NP_013310.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000004.1:70287-71222:- | gene-YLR209C_JAY291 | rna-NM_001182096.1_JAY291 | cds-NP_013310.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:555225-556160:- | gene-YLR209C_MUCL30387 | rna-NM_001182096.1_MUCL30387 | cds-NP_013310.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:560163-561098:- | gene-YLR209C_MUCL30388 | rna-NM_001182096.1_MUCL30388 | cds-NP_013310.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:551425-552360:- | gene-YLR209C_MUCL39482 | rna-NM_001182096.1_MUCL39482 | cds-NP_013310.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:551929-552864:- | gene-YLR209C_MUCL42920 | rna-NM_001182096.1_MUCL42920 | cds-NP_013310.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:560771-561706:- | gene-YLR209C_NCIM3186 | rna-NM_001182096.1_NCIM3186 | cds-NP_013310.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:543844-544779:- | gene-YLR209C_NCYC1407 | rna-NM_001182096.1_NCYC1407 | cds-NP_013310.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:548088-549023:- | gene-YLR209C_PE2H3 | rna-NM_001182096.1_PE2H3 | cds-NP_013310.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:547832-548767:- | gene-YLR209C_PE2H4 | rna-NM_001182096.1_PE2H4 | cds-NP_013310.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:560797-561732:- | gene-YLR209C_S288C | rna-NM_001182096.1_S288C | cds-NP_013310.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000042.1:70330-71265:- | gene-YLR209C_SA1 | rna-NM_001182096.1_SA1 | cds-NP_013310.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:545882-546817:- | gene-YLR209C_ThermosaccDry | rna-NM_001182096.1_ThermosaccDry | cds-NP_013310.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:557223-558158:- | gene-YLR209C_VR1 | rna-NM_001182096.1_VR1 | cds-NP_013310.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000024.1:70166-71101:- | gene-YLR209C_ZTW1 | rna-NM_001182096.1_ZTW1 | cds-NP_013310.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:531962-532897:- | gene-YLR209C_Sparadoxus | rna-NM_001182096.1_Sparadoxus | cds-NP_013310.1_Sparadoxus | 90.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |