Gene name: PMT4
Reference locus (S288C): YJR143C
Gene biotype: protein_coding
Description: Dolichyl-phosphate-mannose--protein mannosyltransferase 4; Protein O-mannosyltransferase; transfers mannose residues from dolichyl phosphate-D-mannose to protein serine/threonine residues; appears to form homodimers in vivo and does not complex with other Pmt proteins; target for new antifungals; Belongs to the glycosyltransferase 39 family
Top 10 interactors (score): KRE2 (0.974); PMT1 (0.972); KTR1 (0.958); PMT2 (0.957); KTR3 (0.915); PMT3 (0.905); OAC1 (0.899); VAN1 (0.887); PMT5 (0.872); MNN11 (0.868); GPI14 (0.853); MSB2 (0.825); PSA1 (0.824); GAS1 (0.811); MNN10 (0.805); GPI18 (0.788); HOC1 (0.782); ALG7 (0.778); MNN9 (0.771); PMT6 (0.753)
Homologues (species, bitscore): POMT2 (Homo sapiens, 325.5); Pomt2 (Mus musculus, 332.8); pomt2 (Danio rerio, 338.6); POMT2 (Xenopus tropicalis, 342.4); rt (Drosophila melanogaster, 326.6); R12E2.13 (Caenorhabditis elegans, 50.8); SDF2 (Arabidopsis thaliana, 50.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:669823-672111:- | gene-YJR143C_AKU4011 | rna-NM_001181801.1_AKU4011 | cds-NP_012677.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000076.1:1490-3778:+ | gene-YJR143C_BG1 | rna-NM_001181801.1_BG1 | cds-NP_012677.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:685556-687844:- | gene-YJR143C_Bruggeman | rna-NM_001181801.1_Bruggeman | cds-NP_012677.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:690191-692479:- | gene-YJR143C_CAT1 | rna-NM_001181801.1_CAT1 | cds-NP_012677.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:681867-684155:- | gene-YJR143C_CBS1585 | rna-NM_001181801.1_CBS1585 | cds-NP_012677.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:700737-703025:- | gene-YJR143C_CBS436 | rna-NM_001181801.1_CBS436 | cds-NP_012677.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:668642-670930:- | gene-YJR143C_CBS6412 | rna-NM_001181801.1_CBS6412 | cds-NP_012677.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:671301-673589:- | gene-YJR143C_CBS6413 | rna-NM_001181801.1_CBS6413 | cds-NP_012677.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:680685-682973:- | gene-YJR143C_CENPK1137D | rna-NM_001181801.1_CENPK1137D | cds-NP_012677.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:674245-676533:- | gene-YJR143C_EthanolRed | rna-NM_001181801.1_EthanolRed | cds-NP_012677.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:685708-687996:- | gene-YJR143C_FaliES1 | rna-NM_001181801.1_FaliES1 | cds-NP_012677.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000054.1:1162-3450:+ | gene-YJR143C_JAY291 | rna-NM_001181801.1_JAY291 | cds-NP_012677.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:684582-686870:- | gene-YJR143C_MUCL30387 | rna-NM_001181801.1_MUCL30387 | cds-NP_012677.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:682069-684357:- | gene-YJR143C_MUCL30388 | rna-NM_001181801.1_MUCL30388 | cds-NP_012677.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:675352-677640:- | gene-YJR143C_MUCL39482 | rna-NM_001181801.1_MUCL39482 | cds-NP_012677.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:680087-682375:- | gene-YJR143C_MUCL42920 | rna-NM_001181801.1_MUCL42920 | cds-NP_012677.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:698305-700593:- | gene-YJR143C_NCIM3186 | rna-NM_001181801.1_NCIM3186 | cds-NP_012677.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:672899-675187:- | gene-YJR143C_NCYC1407 | rna-NM_001181801.1_NCYC1407 | cds-NP_012677.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:691090-693378:- | gene-YJR143C_PE2H3 | rna-NM_001181801.1_PE2H3 | cds-NP_012677.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:684779-687067:- | gene-YJR143C_PE2H4 | rna-NM_001181801.1_PE2H4 | cds-NP_012677.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:698326-700614:- | gene-YJR143C_S288C | rna-NM_001181801.1_S288C | cds-NP_012677.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000069.1:1515-3803:+ | gene-YJR143C_SA1 | rna-NM_001181801.1_SA1 | cds-NP_012677.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:679639-681927:- | gene-YJR143C_ThermosaccDry | rna-NM_001181801.1_ThermosaccDry | cds-NP_012677.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:682010-684298:- | gene-YJR143C_VR1 | rna-NM_001181801.1_VR1 | cds-NP_012677.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:658987-661275:- | gene-YJR143C_ZTW1 | rna-NM_001181801.1_ZTW1 | cds-NP_012677.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:693283-695571:- | gene-YJR143C_Sparadoxus | rna-NM_001181801.1_Sparadoxus | cds-NP_012677.1_Sparadoxus | 91.9 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |