Gene name: PMT1
Reference locus (S288C): YDL095W
Gene biotype: protein_coding
Description: Dolichyl-phosphate-mannose--protein mannosyltransferase 1; Protein O-mannosyltransferase of the ER membrane; transfers mannose from dolichyl phosphate-D-mannose to protein serine and threonine residues; 1 of 7 related proteins involved in O-glycosylation which is essential for cell wall rigidity; involved in ER quality control; amino terminus faces cytoplasm, carboxyl terminus faces ER lumen
Top 10 interactors (score): PMT2 (0.999); PMT3 (0.987); PMT4 (0.972); HOC1 (0.915); PMT5 (0.913); KTR3 (0.908); KRE2 (0.902); KTR1 (0.902); MNN10 (0.9); ALG6 (0.798); CWH43 (0.757); VAN1 (0.748); GPI14 (0.743); GPI18 (0.742); ANP1 (0.731); MNN9 (0.723); MNN11 (0.721); PBN1 (0.72); PGA1 (0.72); WBP1 (0.717)
Homologues (species, bitscore): POMT2 (Homo sapiens, 346.3); Pomt2 (Mus musculus, 341.3); pomt2 (Danio rerio, 314.7); POMT2 (Xenopus tropicalis, 344.4); tw (Drosophila melanogaster, 351.7); R12E2.13 (Caenorhabditis elegans, 58.5); SDF2 (Arabidopsis thaliana, 72.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:271672-274125:+ | gene-YDL095W_AKU4011 | rna-NM_001180154.1_AKU4011 | cds-NP_010188.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:275820-278273:- | gene-YDL095W_BG1 | rna-NM_001180154.1_BG1 | cds-NP_010188.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:289094-291547:+ | gene-YDL095W_Bruggeman | rna-NM_001180154.1_Bruggeman | cds-NP_010188.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:285831-288284:+ | gene-YDL095W_CAT1 | rna-NM_001180154.1_CAT1 | cds-NP_010188.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:269944-272397:+ | gene-YDL095W_CBS1585 | rna-NM_001180154.1_CBS1585 | cds-NP_010188.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:286609-289062:+ | gene-YDL095W_CBS436 | rna-NM_001180154.1_CBS436 | cds-NP_010188.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:268372-270825:+ | gene-YDL095W_CBS6412 | rna-NM_001180154.1_CBS6412 | cds-NP_010188.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:287997-290450:+ | gene-YDL095W_CBS6413 | rna-NM_001180154.1_CBS6413 | cds-NP_010188.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:285880-288333:+ | gene-YDL095W_CENPK1137D | rna-NM_001180154.1_CENPK1137D | cds-NP_010188.1_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:282706-285159:+ | gene-YDL095W_EthanolRed | rna-NM_001180154.1_EthanolRed | cds-NP_010188.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:288678-291131:+ | gene-YDL095W_FaliES1 | rna-NM_001180154.1_FaliES1 | cds-NP_010188.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000010.1:58727-61180:+ | gene-YDL095W_JAY291 | rna-NM_001180154.1_JAY291 | cds-NP_010188.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:286857-289310:+ | gene-YDL095W_MUCL30387 | rna-NM_001180154.1_MUCL30387 | cds-NP_010188.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:277633-280086:+ | gene-YDL095W_MUCL30388 | rna-NM_001180154.1_MUCL30388 | cds-NP_010188.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:271049-273502:+ | gene-YDL095W_MUCL39482 | rna-NM_001180154.1_MUCL39482 | cds-NP_010188.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:192810-195263:+ | gene-YDL095W_MUCL42920 | rna-NM_001180154.1_MUCL42920 | cds-NP_010188.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:286982-289435:+ | gene-YDL095W_NCIM3186 | rna-NM_001180154.1_NCIM3186 | cds-NP_010188.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:271064-273517:+ | gene-YDL095W_NCYC1407 | rna-NM_001180154.1_NCYC1407 | cds-NP_010188.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:277844-280297:+ | gene-YDL095W_PE2H3 | rna-NM_001180154.1_PE2H3 | cds-NP_010188.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:277844-280297:+ | gene-YDL095W_PE2H4 | rna-NM_001180154.1_PE2H4 | cds-NP_010188.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:287059-289512:+ | gene-YDL095W_S288C | rna-NM_001180154.1_S288C | cds-NP_010188.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000010.1:145407-147860:- | gene-YDL095W_SA1 | rna-NM_001180154.1_SA1 | cds-NP_010188.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:288189-290642:+ | gene-YDL095W_ThermosaccDry | rna-NM_001180154.1_ThermosaccDry | cds-NP_010188.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:290262-292715:+ | gene-YDL095W_VR1 | rna-NM_001180154.1_VR1 | cds-NP_010188.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:286108-288561:+ | gene-YDL095W_ZTW1 | rna-NM_001180154.1_ZTW1 | cds-NP_010188.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:288235-290688:+ | gene-YDL095W_Sparadoxus | rna-NM_001180154.1_Sparadoxus | cds-NP_010188.1_Sparadoxus | 92.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |