Gene name: PMP2
Reference locus (S288C): YEL017C-A
Gene biotype: protein_coding
Description: Proteolipid associated with plasma membrane H(+)-ATPase (Pma1p); regulates plasma membrane H(+)-ATPase activity; protein abundance increases in response to DNA replication stress; PMP2 has a paralog, PMP1, that arose from the whole genome duplication
Top 10 interactors (score): PMP1 (0.881); YPL264C (0.815); YDR193W (0.768); YML007C-A (0.745); GOT1 (0.713); YSW1 (0.698); PMA1 (0.679); GTT3 (0.66); ERD1 (0.648); SRP40 (0.611); FMP10 (0.574); PMP3 (0.547); AST1 (0.499); OST4 (0.497); PUF2 (0.489); YML020W (0.487); YIP3 (0.454); LIH1 (0.45); PHS1 (0.45); MRN1 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:116823-116954:- | gene-YEL017C-A_AKU4011 | rna-NM_001180029.1_AKU4011 | cds-NP_010898.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:309008-309139:+ | gene-YEL017C-A_BG1 | rna-NM_001180029.1_BG1 | cds-NP_010898.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:123352-123483:- | gene-YEL017C-A_Bruggeman | rna-NM_001180029.1_Bruggeman | cds-NP_010898.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:119004-119135:- | gene-YEL017C-A_CAT1 | rna-NM_001180029.1_CAT1 | cds-NP_010898.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:116765-116896:- | gene-YEL017C-A_CBS1585 | rna-NM_001180029.1_CBS1585 | cds-NP_010898.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:118403-118534:- | gene-YEL017C-A_CBS436 | rna-NM_001180029.1_CBS436 | cds-NP_010898.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:117043-117174:- | gene-YEL017C-A_CBS6412 | rna-NM_001180029.1_CBS6412 | cds-NP_010898.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:121650-121781:- | gene-YEL017C-A_CBS6413 | rna-NM_001180029.1_CBS6413 | cds-NP_010898.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:120655-120786:- | gene-YEL017C-A_CENPK1137D | rna-NM_001180029.1_CENPK1137D | cds-NP_010898.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:117144-117275:- | gene-YEL017C-A_EthanolRed | rna-NM_001180029.1_EthanolRed | cds-NP_010898.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:117403-117534:- | gene-YEL017C-A_FaliES1 | rna-NM_001180029.1_FaliES1 | cds-NP_010898.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000398.1:36295-36426:- | gene-YEL017C-A_JAY291 | rna-NM_001180029.1_JAY291 | cds-NP_010898.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:121072-121203:- | gene-YEL017C-A_MUCL30387 | rna-NM_001180029.1_MUCL30387 | cds-NP_010898.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:117042-117173:- | gene-YEL017C-A_MUCL30388 | rna-NM_001180029.1_MUCL30388 | cds-NP_010898.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:116127-116258:- | gene-YEL017C-A_MUCL39482 | rna-NM_001180029.1_MUCL39482 | cds-NP_010898.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:120757-120888:- | gene-YEL017C-A_MUCL42920 | rna-NM_001180029.1_MUCL42920 | cds-NP_010898.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:122797-122928:- | gene-YEL017C-A_NCIM3186 | rna-NM_001180029.1_NCIM3186 | cds-NP_010898.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:121232-121363:- | gene-YEL017C-A_NCYC1407 | rna-NM_001180029.1_NCYC1407 | cds-NP_010898.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:125262-125393:- | gene-YEL017C-A_PE2H3 | rna-NM_001180029.1_PE2H3 | cds-NP_010898.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:121177-121308:- | gene-YEL017C-A_PE2H4 | rna-NM_001180029.1_PE2H4 | cds-NP_010898.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:122798-122929:- | gene-YEL017C-A_S288C | rna-NM_001180029.1_S288C | cds-NP_010898.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000020.1:120297-120428:+ | gene-YEL017C-A_SA1 | rna-NM_001180029.1_SA1 | cds-NP_010898.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:117808-117939:- | gene-YEL017C-A_ThermosaccDry | rna-NM_001180029.1_ThermosaccDry | cds-NP_010898.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:117353-117484:- | gene-YEL017C-A_VR1 | rna-NM_001180029.1_VR1 | cds-NP_010898.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:116170-116301:- | gene-YEL017C-A_ZTW1 | rna-NM_001180029.1_ZTW1 | cds-NP_010898.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:119614-119745:- | gene-YEL017C-A_Sparadoxus | rna-NM_001180029.1_Sparadoxus | cds-NP_010898.1_Sparadoxus | 97.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |