Gene name: PMP1
Reference locus (S288C): YCR024C-A
Gene biotype: protein_coding
Description: Regulatory subunit for the plasma membrane H(+)-ATPase Pma1p; small single-membrane span proteolipid; forms unique helix and positively charged cytoplasmic domain that is able to specifically segregate phosphatidylserines; PMP1 has a paralog, PMP2, that arose from the whole genome duplication
Top 10 interactors (score): PMP2 (0.881); PMA1 (0.856); YCR024C-B (0.766); YER138W-A (0.766); AST1 (0.699); ALF1 (0.617); MRN1 (0.551); URA2 (0.545); PMP3 (0.526); SCP160 (0.5); SAM2 (0.486); URA4 (0.481); MRH1 (0.454); PAB1 (0.451); OST4 (0.45); FKS1 (0.443); MEP2 (0.439); ACT1 (0.426); TDH2 (0.412); YEF3 (0.406)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:157430-157552:- | gene-YCR024C-A_AKU4011 | rna-NM_001178739.1_AKU4011 | cds-NP_058137.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000067.1:11584-11706:- | gene-YCR024C-A_BG1 | rna-NM_001178739.1_BG1 | cds-NP_058137.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:152750-152872:- | gene-YCR024C-A_Bruggeman | rna-NM_001178739.1_Bruggeman | cds-NP_058137.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:164320-164442:- | gene-YCR024C-A_CAT1 | rna-NM_001178739.1_CAT1 | cds-NP_058137.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:152191-152313:- | gene-YCR024C-A_CBS1585 | rna-NM_001178739.1_CBS1585 | cds-NP_058137.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:163331-163453:- | gene-YCR024C-A_CBS436 | rna-NM_001178739.1_CBS436 | cds-NP_058137.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:146044-146166:- | gene-YCR024C-A_CBS6412 | rna-NM_001178739.1_CBS6412 | cds-NP_058137.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:158368-158490:- | gene-YCR024C-A_CBS6413 | rna-NM_001178739.1_CBS6413 | cds-NP_058137.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:162427-162549:- | gene-YCR024C-A_CENPK1137D | rna-NM_001178739.1_CENPK1137D | cds-NP_058137.1_CENPK1137D | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:155438-155560:- | gene-YCR024C-A_EthanolRed | rna-NM_001178739.1_EthanolRed | cds-NP_058137.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:158299-158421:- | gene-YCR024C-A_FaliES1 | rna-NM_001178739.1_FaliES1 | cds-NP_058137.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000371.1:5354-5476:+ | gene-YCR024C-A_JAY291 | rna-NM_001178739.1_JAY291 | cds-NP_058137.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:149929-150051:- | gene-YCR024C-A_MUCL30387 | rna-NM_001178739.1_MUCL30387 | cds-NP_058137.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:150197-150319:- | gene-YCR024C-A_MUCL30388 | rna-NM_001178739.1_MUCL30388 | cds-NP_058137.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:158515-158637:- | gene-YCR024C-A_MUCL39482 | rna-NM_001178739.1_MUCL39482 | cds-NP_058137.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:154909-155031:- | gene-YCR024C-A_MUCL42920 | rna-NM_001178739.1_MUCL42920 | cds-NP_058137.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:162577-162699:- | gene-YCR024C-A_NCIM3186 | rna-NM_001178739.1_NCIM3186 | cds-NP_058137.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:160279-160401:- | gene-YCR024C-A_NCYC1407 | rna-NM_001178739.1_NCYC1407 | cds-NP_058137.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:168983-169105:- | gene-YCR024C-A_PE2H3 | rna-NM_001178739.1_PE2H3 | cds-NP_058137.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:163604-163726:- | gene-YCR024C-A_PE2H4 | rna-NM_001178739.1_PE2H4 | cds-NP_058137.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:162945-163067:- | gene-YCR024C-A_S288C | rna-NM_001178739.1_S288C | cds-NP_058137.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000083.1:11474-11596:- | gene-YCR024C-A_SA1 | rna-NM_001178739.1_SA1 | cds-NP_058137.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:158370-158492:- | gene-YCR024C-A_ThermosaccDry | rna-NM_001178739.1_ThermosaccDry | cds-NP_058137.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:169135-169257:- | gene-YCR024C-A_VR1 | rna-NM_001178739.1_VR1 | cds-NP_058137.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:157303-157425:- | gene-YCR024C-A_ZTW1 | rna-NM_001178739.1_ZTW1 | cds-NP_058137.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:190567-190689:- | gene-YCR024C-A_Sparadoxus | rna-NM_001178739.1_Sparadoxus | cds-NP_058137.1_Sparadoxus | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |