Gene name: PMI40
Reference locus (S288C): YER003C
Gene biotype: protein_coding
Description: Mannose-6-phosphate isomerase; catalyzes the interconversion of fructose-6-P and mannose-6-P; required for early steps in protein mannosylation
Top 10 interactors (score): PGI1 (0.998); SEC53 (0.998); PSA1 (0.974); YLR446W (0.971); FBP1 (0.965); GLK1 (0.949); HXK2 (0.944); EMI2 (0.944); HXK1 (0.944); GFA1 (0.932); PFK2 (0.93); PFK1 (0.929); DSF1 (0.925); MAN2 (0.925); YMR084W (0.913); FBP26 (0.905); PFK27 (0.905); YLR345W (0.904); PFK26 (0.903); GAL10 (0.845)
Homologues (species, bitscore): MPI (Homo sapiens, 295.0); Mpi (Mus musculus, 286.6); mpi (Danio rerio, 288.9); mpi (Xenopus tropicalis, 302.8); CG8417 (Drosophila melanogaster, 224.9); ZK632.4 (Caenorhabditis elegans, 232.3); DIN9 (Arabidopsis thaliana, 271.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:151427-152808:- | gene-YER003C_AKU4011 | rna-NM_001178894.1_AKU4011 | cds-NP_010918.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:272874-274252:+ | gene-YER003C_BG1 | rna-NM_001178894.1_BG1 | cds-NP_010918.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:159116-160495:- | gene-YER003C_Bruggeman | rna-NM_001178894.1_Bruggeman | cds-NP_010918.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:154348-155726:- | gene-YER003C_CAT1 | rna-NM_001178894.1_CAT1 | cds-NP_010918.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:151736-153117:- | gene-YER003C_CBS1585 | rna-NM_001178894.1_CBS1585 | cds-NP_010918.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:153004-154385:- | gene-YER003C_CBS436 | rna-NM_001178894.1_CBS436 | cds-NP_010918.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:151630-153011:- | gene-YER003C_CBS6412 | rna-NM_001178894.1_CBS6412 | cds-NP_010918.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:156278-157657:- | gene-YER003C_CBS6413 | rna-NM_001178894.1_CBS6413 | cds-NP_010918.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:155563-156944:- | gene-YER003C_CENPK1137D | rna-NM_001178894.1_CENPK1137D | cds-NP_010918.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:152091-153472:- | gene-YER003C_EthanolRed | rna-NM_001178894.1_EthanolRed | cds-NP_010918.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:152351-153732:- | gene-YER003C_FaliES1 | rna-NM_001178894.1_FaliES1 | cds-NP_010918.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000024.1:19324-20702:- | gene-YER003C_JAY291 | rna-NM_001178894.1_JAY291 | cds-NP_010918.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:155650-157031:- | gene-YER003C_MUCL30387 | rna-NM_001178894.1_MUCL30387 | cds-NP_010918.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:152172-153553:- | gene-YER003C_MUCL30388 | rna-NM_001178894.1_MUCL30388 | cds-NP_010918.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:150772-152153:- | gene-YER003C_MUCL39482 | rna-NM_001178894.1_MUCL39482 | cds-NP_010918.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:156644-158025:- | gene-YER003C_MUCL42920 | rna-NM_001178894.1_MUCL42920 | cds-NP_010918.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:157735-159117:- | gene-YER003C_NCIM3186 | rna-NM_001178894.1_NCIM3186 | cds-NP_010918.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:155848-157227:- | gene-YER003C_NCYC1407 | rna-NM_001178894.1_NCYC1407 | cds-NP_010918.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:160150-161528:- | gene-YER003C_PE2H3 | rna-NM_001178894.1_PE2H3 | cds-NP_010918.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:156065-157443:- | gene-YER003C_PE2H4 | rna-NM_001178894.1_PE2H4 | cds-NP_010918.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:157736-159118:- | gene-YER003C_S288C | rna-NM_001178894.1_S288C | cds-NP_010918.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000020.1:84491-85871:+ | gene-YER003C_SA1 | rna-NM_001178894.1_SA1 | cds-NP_010918.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:152757-154138:- | gene-YER003C_ThermosaccDry | rna-NM_001178894.1_ThermosaccDry | cds-NP_010918.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:152241-153619:- | gene-YER003C_VR1 | rna-NM_001178894.1_VR1 | cds-NP_010918.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:150787-152167:- | gene-YER003C_ZTW1 | rna-NM_001178894.1_ZTW1 | cds-NP_010918.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:155502-156870:- | gene-YER003C_Sparadoxus | rna-NM_001178894.1_Sparadoxus | cds-NP_010918.1_Sparadoxus | 92.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |