Gene name: PLP2
Reference locus (S288C): YOR281C
Gene biotype: protein_coding
Description: Phosducin-like protein 2; Protein that interacts with the CCT complex to stimulate actin folding; has similarity to phosducins; null mutant lethality is complemented by mouse phosducin-like protein MgcPhLP; CCT is short for chaperonin containing TCP-1; essential gene
Top 10 interactors (score): PLP1 (0.982); CCT7 (0.966); CCT3 (0.966); TCP1 (0.964); CCT4 (0.956); CCT6 (0.901); CCT8 (0.887); STE4 (0.887); CCT5 (0.838); GPA1 (0.784); STE18 (0.78); CCT2 (0.76); TFB4 (0.744); STU1 (0.714); CSM1 (0.702); NUR1 (0.696); HOF1 (0.693); YJL152W (0.687); MGS1 (0.679); TFG2 (0.661)
Homologues (species, bitscore): PDCL2 (Homo sapiens, 108.6); Pdcl3 (Mus musculus, 114.8); PDCL3 (Danio rerio, 77.8); pdcl3 (Xenopus tropicalis, 107.1); viaf (Drosophila melanogaster, 127.9); AT5G14240 (Arabidopsis thaliana, 93.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:837079-837939:- | gene-YOR281C_AKU4011 | rna-NM_001183700.3_AKU4011 | cds-NP_014924.3_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:239042-239902:- | gene-YOR281C_BG1 | rna-NM_001183700.3_BG1 | cds-NP_014924.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:822512-823372:- | gene-YOR281C_Bruggeman | rna-NM_001183700.3_Bruggeman | cds-NP_014924.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:823183-824043:- | gene-YOR281C_CAT1 | rna-NM_001183700.3_CAT1 | cds-NP_014924.3_CAT1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:820097-820957:- | gene-YOR281C_CBS1585 | rna-NM_001183700.3_CBS1585 | cds-NP_014924.3_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:818744-819604:- | gene-YOR281C_CBS436 | rna-NM_001183700.3_CBS436 | cds-NP_014924.3_CBS436 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:816950-817810:- | gene-YOR281C_CBS6412 | rna-NM_001183700.3_CBS6412 | cds-NP_014924.3_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:825808-826668:- | gene-YOR281C_CBS6413 | rna-NM_001183700.3_CBS6413 | cds-NP_014924.3_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:846039-846899:- | gene-YOR281C_CENPK1137D | rna-NM_001183700.3_CENPK1137D | cds-NP_014924.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:813206-814066:- | gene-YOR281C_EthanolRed | rna-NM_001183700.3_EthanolRed | cds-NP_014924.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:818605-819465:- | gene-YOR281C_FaliES1 | rna-NM_001183700.3_FaliES1 | cds-NP_014924.3_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000381.1:7451-8311:+ | gene-YOR281C_JAY291 | rna-NM_001183700.3_JAY291 | cds-NP_014924.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:826749-827609:- | gene-YOR281C_MUCL30387 | rna-NM_001183700.3_MUCL30387 | cds-NP_014924.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:834726-835586:- | gene-YOR281C_MUCL30388 | rna-NM_001183700.3_MUCL30388 | cds-NP_014924.3_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:827443-828303:- | gene-YOR281C_MUCL39482 | rna-NM_001183700.3_MUCL39482 | cds-NP_014924.3_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:836928-837788:- | gene-YOR281C_MUCL42920 | rna-NM_001183700.3_MUCL42920 | cds-NP_014924.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:846158-847018:- | gene-YOR281C_NCIM3186 | rna-NM_001183700.3_NCIM3186 | cds-NP_014924.3_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:827648-828508:- | gene-YOR281C_NCYC1407 | rna-NM_001183700.3_NCYC1407 | cds-NP_014924.3_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:826724-827584:- | gene-YOR281C_PE2H3 | rna-NM_001183700.3_PE2H3 | cds-NP_014924.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:837101-837961:- | gene-YOR281C_PE2H4 | rna-NM_001183700.3_PE2H4 | cds-NP_014924.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:846269-847129:- | gene-YOR281C_S288C | rna-NM_001183700.3_S288C | cds-NP_014924.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:256285-257145:- | gene-YOR281C_SA1 | rna-NM_001183700.3_SA1 | cds-NP_014924.3_SA1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:817788-818648:- | gene-YOR281C_ThermosaccDry | rna-NM_001183700.3_ThermosaccDry | cds-NP_014924.3_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:881164-882024:- | gene-YOR281C_VR1 | rna-NM_001183700.3_VR1 | cds-NP_014924.3_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:550676-551536:- | gene-YOR281C_ZTW1 | rna-NM_001183700.3_ZTW1 | cds-NP_014924.3_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:823439-824299:- | gene-YOR281C_Sparadoxus | rna-NM_001183700.3_Sparadoxus | cds-NP_014924.3_Sparadoxus | 90.8 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |