Gene name: PLN1
Reference locus (S288C): YKR046C
Gene biotype: protein_coding
Description: Protein of unknown function that localizes to lipid particles; localization suggests a role in lipid metabolism; expression pattern suggests a role in respiratory growth; computational analysis of large-scale protein-protein interaction data suggests a role in ATP/ADP exchange
Top 10 interactors (score): LDB16 (0.886); SEI1 (0.836); YFT2 (0.822); IML2 (0.806); SCS3 (0.786); OSW5 (0.765); ERG6 (0.747); TGL3 (0.744); DGA1 (0.713); YEH1 (0.712); TGL1 (0.71); MOH1 (0.704); SPS4 (0.698); FAT1 (0.695); OSW2 (0.694); HFD1 (0.688); AYR1 (0.681); RRT8 (0.656); TGL4 (0.656); TGL5 (0.615)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:509518-510369:- | gene-YKR046C_AKU4011 | rna-NM_001179836.3_AKU4011 | cds-NP_012972.3_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:133158-134009:+ | gene-YKR046C_BG1 | rna-NM_001179836.3_BG1 | cds-NP_012972.3_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:531697-532548:- | gene-YKR046C_Bruggeman | rna-NM_001179836.3_Bruggeman | cds-NP_012972.3_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:528116-528967:- | gene-YKR046C_CAT1 | rna-NM_001179836.3_CAT1 | cds-NP_012972.3_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:522259-523110:- | gene-YKR046C_CBS1585 | rna-NM_001179836.3_CBS1585 | cds-NP_012972.3_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:521089-521940:- | gene-YKR046C_CBS436 | rna-NM_001179836.3_CBS436 | cds-NP_012972.3_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:506436-507287:- | gene-YKR046C_CBS6412 | rna-NM_001179836.3_CBS6412 | cds-NP_012972.3_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:522078-522929:- | gene-YKR046C_CBS6413 | rna-NM_001179836.3_CBS6413 | cds-NP_012972.3_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:523879-524730:- | gene-YKR046C_CENPK1137D | rna-NM_001179836.3_CENPK1137D | cds-NP_012972.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:519839-520690:- | gene-YKR046C_EthanolRed | rna-NM_001179836.3_EthanolRed | cds-NP_012972.3_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:522976-523827:- | gene-YKR046C_FaliES1 | rna-NM_001179836.3_FaliES1 | cds-NP_012972.3_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000077.1:29975-30826:+ | gene-YKR046C_JAY291 | rna-NM_001179836.3_JAY291 | cds-NP_012972.3_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:532095-532946:- | gene-YKR046C_MUCL30387 | rna-NM_001179836.3_MUCL30387 | cds-NP_012972.3_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:526458-527309:- | gene-YKR046C_MUCL30388 | rna-NM_001179836.3_MUCL30388 | cds-NP_012972.3_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:521586-522437:- | gene-YKR046C_MUCL39482 | rna-NM_001179836.3_MUCL39482 | cds-NP_012972.3_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:527608-528459:- | gene-YKR046C_MUCL42920 | rna-NM_001179836.3_MUCL42920 | cds-NP_012972.3_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:524212-525063:- | gene-YKR046C_NCIM3186 | rna-NM_001179836.3_NCIM3186 | cds-NP_012972.3_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:521800-522651:- | gene-YKR046C_NCYC1407 | rna-NM_001179836.3_NCYC1407 | cds-NP_012972.3_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:547162-548013:- | gene-YKR046C_PE2H3 | rna-NM_001179836.3_PE2H3 | cds-NP_012972.3_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:531560-532411:- | gene-YKR046C_PE2H4 | rna-NM_001179836.3_PE2H4 | cds-NP_012972.3_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:524223-525074:- | gene-YKR046C_S288C | rna-NM_001179836.3_S288C | cds-NP_012972.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000093.1:7321-8172:- | gene-YKR046C_SA1 | rna-NM_001179836.3_SA1 | cds-NP_012972.3_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:522215-523066:- | gene-YKR046C_ThermosaccDry | rna-NM_001179836.3_ThermosaccDry | cds-NP_012972.3_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:522231-523082:- | gene-YKR046C_VR1 | rna-NM_001179836.3_VR1 | cds-NP_012972.3_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:520229-521080:- | gene-YKR046C_ZTW1 | rna-NM_001179836.3_ZTW1 | cds-NP_012972.3_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:545658-546509:- | gene-YKR046C_Sparadoxus | rna-NM_001179836.3_Sparadoxus | cds-NP_012972.3_Sparadoxus | 91.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |