Gene name: PLM2
Reference locus (S288C): YDR501W
Gene biotype: protein_coding
Description: Protein PLM2; Putative transcription factor, contains Forkhead Associated domain; found associated with chromatin; target of SBF transcription factor; induced in response to DNA damaging agents and deletion of telomerase; PLM2 has a paralog, TOS4, that arose from the whole genome duplication; Belongs to the PLM2/TOS4 family
Top 10 interactors (score): CDC6 (0.899); DUT1 (0.881); RNR3 (0.808); RNR1 (0.764); DIN7 (0.717); RNR2 (0.7); DUN1 (0.698); HCM1 (0.683); CDC28 (0.675); MRC1 (0.67); POG1 (0.651); RAD54 (0.65); TCM62 (0.618); PAU13 (0.61); YOX1 (0.6); AZF1 (0.582); YPR089W (0.581); YPR174C (0.572); BOP3 (0.568); HLR1 (0.567)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1391338-1392903:+ | gene-YDR501W_AKU4011 | rna-NM_001180809.1_AKU4011 | cds-NP_010789.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000073.1:32897-34462:+ | gene-YDR501W_BG1 | rna-NM_001180809.1_BG1 | cds-NP_010789.1_BG1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1422659-1424224:+ | gene-YDR501W_Bruggeman | rna-NM_001180809.1_Bruggeman | cds-NP_010789.1_Bruggeman | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1399838-1401403:+ | gene-YDR501W_CAT1 | rna-NM_001180809.1_CAT1 | cds-NP_010789.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1385580-1387145:+ | gene-YDR501W_CBS1585 | rna-NM_001180809.1_CBS1585 | cds-NP_010789.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1404936-1406501:+ | gene-YDR501W_CBS436 | rna-NM_001180809.1_CBS436 | cds-NP_010789.1_CBS436 | 98.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1381222-1382787:+ | gene-YDR501W_CBS6412 | rna-NM_001180809.1_CBS6412 | cds-NP_010789.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1404237-1405802:+ | gene-YDR501W_CBS6413 | rna-NM_001180809.1_CBS6413 | cds-NP_010789.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1450047-1451612:+ | gene-YDR501W_CENPK1137D | rna-NM_001180809.1_CENPK1137D | cds-NP_010789.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1394627-1396192:+ | gene-YDR501W_EthanolRed | rna-NM_001180809.1_EthanolRed | cds-NP_010789.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1398180-1399745:+ | gene-YDR501W_FaliES1 | rna-NM_001180809.1_FaliES1 | cds-NP_010789.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000026.1:96431-97996:+ | gene-YDR501W_JAY291 | rna-NM_001180809.1_JAY291 | cds-NP_010789.1_JAY291 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1405185-1406750:+ | gene-YDR501W_MUCL30387 | rna-NM_001180809.1_MUCL30387 | cds-NP_010789.1_MUCL30387 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1387177-1388742:+ | gene-YDR501W_MUCL30388 | rna-NM_001180809.1_MUCL30388 | cds-NP_010789.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1377065-1378630:+ | gene-YDR501W_MUCL39482 | rna-NM_001180809.1_MUCL39482 | cds-NP_010789.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1319858-1321423:+ | gene-YDR501W_MUCL42920 | rna-NM_001180809.1_MUCL42920 | cds-NP_010789.1_MUCL42920 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1451276-1452841:+ | gene-YDR501W_NCIM3186 | rna-NM_001180809.1_NCIM3186 | cds-NP_010789.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1390851-1392416:+ | gene-YDR501W_NCYC1407 | rna-NM_001180809.1_NCYC1407 | cds-NP_010789.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1401698-1403263:+ | gene-YDR501W_PE2H3 | rna-NM_001180809.1_PE2H3 | cds-NP_010789.1_PE2H3 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1407274-1408839:+ | gene-YDR501W_PE2H4 | rna-NM_001180809.1_PE2H4 | cds-NP_010789.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1451353-1452918:+ | gene-YDR501W_S288C | rna-NM_001180809.1_S288C | cds-NP_010789.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:164215-165780:- | gene-YDR501W_SA1 | rna-NM_001180809.1_SA1 | cds-NP_010789.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1402402-1403967:+ | gene-YDR501W_ThermosaccDry | rna-NM_001180809.1_ThermosaccDry | cds-NP_010789.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1418144-1419709:+ | gene-YDR501W_VR1 | rna-NM_001180809.1_VR1 | cds-NP_010789.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:445070-446635:+ | gene-YDR501W_ZTW1 | rna-NM_001180809.1_ZTW1 | cds-NP_010789.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1405270-1406841:+ | gene-YDR501W_Sparadoxus | rna-NM_001180809.1_Sparadoxus | cds-NP_010789.1_Sparadoxus | 86.2 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |