Gene name: PLB2
Reference locus (S288C): YMR006C
Gene biotype: protein_coding
Description: Phospholipase B (lysophospholipase) involved in lipid metabolism; displays transacylase activity in vitro; overproduction confers resistance to lysophosphatidylcholine
Top 10 interactors (score): NTE1 (0.961); GDE1 (0.956); TGL4 (0.955); TGL5 (0.954); ALE1 (0.947); FUS3 (0.938); SLT2 (0.938); SMK1 (0.938); HOG1 (0.938); PLB1 (0.883); PLB3 (0.857); GIT1 (0.748); LRO1 (0.718); ABZ1 (0.699); DDL1 (0.695); TGL2 (0.676); CLD1 (0.617); YEH1 (0.603); SPO14 (0.577); EEB1 (0.574)
Homologues (species, bitscore): PLA2G4F (Homo sapiens, 66.2); Pla2g4e (Mus musculus, 64.3); LOC565386 (Danio rerio, 71.2); ENSXETP00000034409 (Xenopus tropicalis, 59.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:327177-329297:- | gene-YMR006C_AKU4011 | rna-NM_001182502.1_AKU4011 | cds-NP_013719.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:213568-215688:+ | gene-YMR006C_BG1 | rna-NM_001182502.1_BG1 | cds-NP_013719.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:267123-269243:- | gene-YMR006C_Bruggeman | rna-NM_001182502.1_Bruggeman | cds-NP_013719.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:269619-271739:- | gene-YMR006C_CAT1 | rna-NM_001182502.1_CAT1 | cds-NP_013719.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:260118-262238:- | gene-YMR006C_CBS1585 | rna-NM_001182502.1_CBS1585 | cds-NP_013719.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:265661-267781:- | gene-YMR006C_CBS436 | rna-NM_001182502.1_CBS436 | cds-NP_013719.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:373522-375642:- | gene-YMR006C_CBS6412 | rna-NM_001182502.1_CBS6412 | cds-NP_013719.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:259374-261494:- | gene-YMR006C_CBS6413 | rna-NM_001182502.1_CBS6413 | cds-NP_013719.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:272291-274411:- | gene-YMR006C_CENPK1137D | rna-NM_001182502.1_CENPK1137D | cds-NP_013719.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:259925-262045:- | gene-YMR006C_EthanolRed | rna-NM_001182502.1_EthanolRed | cds-NP_013719.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:263111-265231:- | gene-YMR006C_FaliES1 | rna-NM_001182502.1_FaliES1 | cds-NP_013719.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:171700-173820:+ | gene-YMR006C_JAY291 | rna-NM_001182502.1_JAY291 | cds-NP_013719.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:264851-266971:- | gene-YMR006C_MUCL30387 | rna-NM_001182502.1_MUCL30387 | cds-NP_013719.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:269508-271628:- | gene-YMR006C_MUCL30388 | rna-NM_001182502.1_MUCL30388 | cds-NP_013719.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:260403-262523:- | gene-YMR006C_MUCL39482 | rna-NM_001182502.1_MUCL39482 | cds-NP_013719.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:266210-268330:- | gene-YMR006C_MUCL42920 | rna-NM_001182502.1_MUCL42920 | cds-NP_013719.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:277515-279635:- | gene-YMR006C_NCIM3186 | rna-NM_001182502.1_NCIM3186 | cds-NP_013719.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:260320-262440:- | gene-YMR006C_NCYC1407 | rna-NM_001182502.1_NCYC1407 | cds-NP_013719.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:266253-268373:- | gene-YMR006C_PE2H3 | rna-NM_001182502.1_PE2H3 | cds-NP_013719.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:272348-274468:- | gene-YMR006C_PE2H4 | rna-NM_001182502.1_PE2H4 | cds-NP_013719.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:277561-279681:- | gene-YMR006C_S288C | rna-NM_001182502.1_S288C | cds-NP_013719.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:258587-260707:+ | gene-YMR006C_SA1 | rna-NM_001182502.1_SA1 | cds-NP_013719.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:260176-262296:- | gene-YMR006C_ThermosaccDry | rna-NM_001182502.1_ThermosaccDry | cds-NP_013719.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:264140-266260:- | gene-YMR006C_VR1 | rna-NM_001182502.1_VR1 | cds-NP_013719.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:239234-241354:- | gene-YMR006C_ZTW1 | rna-NM_001182502.1_ZTW1 | cds-NP_013719.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:271688-273799:- | gene-YMR006C_Sparadoxus | rna-NM_001182502.1_Sparadoxus | cds-NP_013719.1_Sparadoxus | 90.3 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |