Gene name: PKC1
Reference locus (S288C): YBL105C
Gene biotype: protein_coding
Description: Protein serine/threonine kinase; essential for cell wall remodeling during growth; localized to sites of polarized growth and the mother-daughter bud neck; homolog of the alpha, beta, and gamma isoforms of mammalian protein kinase C (PKC)
Top 10 interactors (score): RHO1 (0.999); CDC42 (0.997); RHO2 (0.996); SLG1 (0.996); BCK1 (0.987); PKH2 (0.984); PKH1 (0.979); PKH3 (0.974); SWI4 (0.965); ROM2 (0.959); ASC1 (0.958); ACT1 (0.947); BEM1 (0.946); TOR2 (0.941); MID2 (0.938); LRG1 (0.935); SLT2 (0.926); RHO5 (0.915); RLM1 (0.915); SEC1 (0.912)
Homologues (species, bitscore): PKN2 (Homo sapiens, 374.8); Pkn2 (Mus musculus, 372.9); prkcg (Danio rerio, 376.3); prkcb (Xenopus tropicalis, 370.2); Pkc98E (Drosophila melanogaster, 381.3); pkc-1 (Caenorhabditis elegans, 358.6); S6K2 (Arabidopsis thaliana, 232.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:14138-17593:- | gene-YBL105C_AKU4011 | rna-NM_001178345.2_AKU4011 | cds-NP_009445.2_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:4862-8317:- | gene-YBL105C_BG1 | rna-NM_001178345.2_BG1 | cds-NP_009445.2_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:14522-17977:- | gene-YBL105C_Bruggeman | rna-NM_001178345.2_Bruggeman | cds-NP_009445.2_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:16728-20183:- | gene-YBL105C_CAT1 | rna-NM_001178345.2_CAT1 | cds-NP_009445.2_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:6209-9664:- | gene-YBL105C_CBS1585 | rna-NM_001178345.2_CBS1585 | cds-NP_009445.2_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:9161-12616:- | gene-YBL105C_CBS436 | rna-NM_001178345.2_CBS436 | cds-NP_009445.2_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:5997-9452:- | gene-YBL105C_CBS6412 | rna-NM_001178345.2_CBS6412 | cds-NP_009445.2_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:12339-15794:- | gene-YBL105C_CBS6413 | rna-NM_001178345.2_CBS6413 | cds-NP_009445.2_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:8173-11628:- | gene-YBL105C_CENPK1137D | rna-NM_001178345.2_CENPK1137D | cds-NP_009445.2_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:28381-31836:- | gene-YBL105C_EthanolRed | rna-NM_001178345.2_EthanolRed | cds-NP_009445.2_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:28513-31968:- | gene-YBL105C_FaliES1 | rna-NM_001178345.2_FaliES1 | cds-NP_009445.2_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000184.1:5555-9010:- | gene-YBL105C_JAY291 | rna-NM_001178345.2_JAY291 | cds-NP_009445.2_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:13665-17120:- | gene-YBL105C_MUCL30387 | rna-NM_001178345.2_MUCL30387 | cds-NP_009445.2_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:13767-17222:- | gene-YBL105C_MUCL30388 | rna-NM_001178345.2_MUCL30388 | cds-NP_009445.2_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:6365-9820:- | gene-YBL105C_MUCL39482 | rna-NM_001178345.2_MUCL39482 | cds-NP_009445.2_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:13004-16459:- | gene-YBL105C_MUCL42920 | rna-NM_001178345.2_MUCL42920 | cds-NP_009445.2_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:14038-17493:- | gene-YBL105C_NCIM3186 | rna-NM_001178345.2_NCIM3186 | cds-NP_009445.2_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:8037-11492:- | gene-YBL105C_NCYC1407 | rna-NM_001178345.2_NCYC1407 | cds-NP_009445.2_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:14345-17800:- | gene-YBL105C_PE2H3 | rna-NM_001178345.2_PE2H3 | cds-NP_009445.2_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:11977-15432:- | gene-YBL105C_PE2H4 | rna-NM_001178345.2_PE2H4 | cds-NP_009445.2_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:14241-17696:- | gene-YBL105C_S288C | rna-NM_001178345.2_S288C | cds-NP_009445.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:4660-8115:- | gene-YBL105C_SA1 | rna-NM_001178345.2_SA1 | cds-NP_009445.2_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:28475-31930:- | gene-YBL105C_ThermosaccDry | rna-NM_001178345.2_ThermosaccDry | cds-NP_009445.2_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:10690-14145:- | gene-YBL105C_VR1 | rna-NM_001178345.2_VR1 | cds-NP_009445.2_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:5700-9155:- | gene-YBL105C_ZTW1 | rna-NM_001178345.2_ZTW1 | cds-NP_009445.2_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:40636-44091:- | gene-YBL105C_Sparadoxus | rna-NM_001178345.2_Sparadoxus | cds-NP_009445.2_Sparadoxus | 90.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |