Gene name: PIR5
Reference locus (S288C): YJL160C
Gene biotype: protein_coding
Description: Cell wall protein PIR5; Putative protein of unknown function; member of the PIR (Proteins with Internal Repeats) family of cell wall proteins; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, and mCherry fusion localizes to the vacuole; non-essential gene that is required for sporulation; mRNA is weakly cell cycle regulated, peaking in mitosis; YJL160C has a paralog, PIR1, that arose from the whole genome duplication
Top 10 interactors (score): ICS2 (0.75); SKG1 (0.748); YKL033W-A (0.748); PTK1 (0.746); SRL4 (0.746); ECM9 (0.744); RRT8 (0.711); YJL107C (0.698); YPR089W (0.697); FRS2 (0.696); TPH3 (0.674); MSF1 (0.65); TMA23 (0.616); PRM10 (0.615); EMC3 (0.612); FMP23 (0.585); LCP5 (0.574); PSP2 (0.573); PFF1 (0.572); GPI14 (0.57)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:106341-107204:- | gene-YJL160C_AKU4011 | rna-NM_001181593.1_AKU4011 | cds-NP_012375.2_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000186.1:18407-19270:- | gene-YJL160C_BG1 | rna-NM_001181593.1_BG1 | cds-NP_012375.2_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:118166-119029:- | gene-YJL160C_Bruggeman | rna-NM_001181593.1_Bruggeman | cds-NP_012375.2_Bruggeman | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:121894-122757:- | gene-YJL160C_CAT1 | rna-NM_001181593.1_CAT1 | cds-NP_012375.2_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:111976-112839:- | gene-YJL160C_CBS1585 | rna-NM_001181593.1_CBS1585 | cds-NP_012375.2_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:136725-137588:- | gene-YJL160C_CBS436 | rna-NM_001181593.1_CBS436 | cds-NP_012375.2_CBS436 | 98.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:108457-109320:- | gene-YJL160C_CBS6412 | rna-NM_001181593.1_CBS6412 | cds-NP_012375.2_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:109448-110311:- | gene-YJL160C_CBS6413 | rna-NM_001181593.1_CBS6413 | cds-NP_012375.2_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:100408-101271:- | gene-YJL160C_CENPK1137D | rna-NM_001181593.1_CENPK1137D | cds-NP_012375.2_CENPK1137D | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:110635-111498:- | gene-YJL160C_EthanolRed | rna-NM_001181593.1_EthanolRed | cds-NP_012375.2_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:115905-116768:- | gene-YJL160C_FaliES1 | rna-NM_001181593.1_FaliES1 | cds-NP_012375.2_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000164.1:1944-2807:+ | gene-YJL160C_JAY291 | rna-NM_001181593.1_JAY291 | cds-NP_012375.2_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:119892-120755:- | gene-YJL160C_MUCL30387 | rna-NM_001181593.1_MUCL30387 | cds-NP_012375.2_MUCL30387 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:116454-117317:- | gene-YJL160C_MUCL30388 | rna-NM_001181593.1_MUCL30388 | cds-NP_012375.2_MUCL30388 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:110718-111581:- | gene-YJL160C_MUCL39482 | rna-NM_001181593.1_MUCL39482 | cds-NP_012375.2_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:115321-116184:- | gene-YJL160C_MUCL42920 | rna-NM_001181593.1_MUCL42920 | cds-NP_012375.2_MUCL42920 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:117941-118804:- | gene-YJL160C_NCIM3186 | rna-NM_001181593.1_NCIM3186 | cds-NP_012375.2_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:109326-110189:- | gene-YJL160C_NCYC1407 | rna-NM_001181593.1_NCYC1407 | cds-NP_012375.2_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:122066-122929:- | gene-YJL160C_PE2H3 | rna-NM_001181593.1_PE2H3 | cds-NP_012375.2_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:121705-122568:- | gene-YJL160C_PE2H4 | rna-NM_001181593.1_PE2H4 | cds-NP_012375.2_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:117962-118825:- | gene-YJL160C_S288C | rna-NM_001181593.1_S288C | cds-NP_012375.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000022.1:34736-35599:+ | gene-YJL160C_SA1 | rna-NM_001181593.1_SA1 | cds-NP_012375.2_SA1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:109096-109959:- | gene-YJL160C_ThermosaccDry | rna-NM_001181593.1_ThermosaccDry | cds-NP_012375.2_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:115983-116846:- | gene-YJL160C_VR1 | rna-NM_001181593.1_VR1 | cds-NP_012375.2_VR1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:96625-97488:- | gene-YJL160C_ZTW1 | rna-NM_001181593.1_ZTW1 | cds-NP_012375.2_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:121579-122442:- | gene-YJL160C_Sparadoxus | rna-NM_001181593.1_Sparadoxus | cds-NP_012375.2_Sparadoxus | 89.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |