Gene name: PIR1
Reference locus (S288C): YKL164C
Gene biotype: protein_coding
Description: O-glycosylated protein required for cell wall stability; attached to the cell wall via beta-1,3-glucan; mediates mitochondrial translocation of Apn1p; expression regulated by the cell integrity pathway and by Swi5p during the cell cycle; PIR1 has a paralog, YJL160C, that arose from the whole genome duplication
Top 10 interactors (score): HSP150 (0.964); EGT2 (0.778); SCW11 (0.725); BGL2 (0.716); YNL046W (0.713); CRH1 (0.711); CWP1 (0.71); SCW4 (0.677); PST1 (0.658); CCW14 (0.651); TOS1 (0.643); SED1 (0.624); SUN4 (0.587); KEX2 (0.575); TIR1 (0.573); PRY3 (0.552); DSE2 (0.55); UTR2 (0.528); SAG1 (0.526); SCW10 (0.526)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:128646-129656:- | gene-YKL164C_AKU4011 | rna-NM_001179730.1_AKU4011 | cds-NP_012757.1_AKU4011 | 97.6 | 98.5 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:105201-106283:- | gene-YKL164C_BG1 | rna-NM_001179730.1_BG1 | cds-NP_012757.1_BG1 | 94.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:146040-147065:- | gene-YKL164C_Bruggeman | rna-NM_001179730.1_Bruggeman | cds-NP_012757.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:140994-142019:- | gene-YKL164C_CAT1 | rna-NM_001179730.1_CAT1 | cds-NP_012757.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:140630-141717:- | gene-YKL164C_CBS1585 | rna-NM_001179730.1_CBS1585 | cds-NP_012757.1_CBS1585 | 92.9 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:139390-140415:- | gene-YKL164C_CBS436 | rna-NM_001179730.1_CBS436 | cds-NP_012757.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:126224-127120:- | gene-YKL164C_CBS6412 | rna-NM_001179730.1_CBS6412 | cds-NP_012757.1_CBS6412 | 87.2 | 87.4 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:141346-142242:- | gene-YKL164C_CBS6413 | rna-NM_001179730.1_CBS6413 | cds-NP_012757.1_CBS6413 | 87.0 | 87.4 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:141604-142466:- | gene-YKL164C_CENPK1137D | rna-NM_001179730.1_CENPK1137D | cds-NP_012757.1_CENPK1137D | 70.7 | 84.1 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:139544-140512:- | gene-YKL164C_EthanolRed | rna-NM_001179730.1_EthanolRed | cds-NP_012757.1_EthanolRed | 94.3 | 94.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:140245-141270:- | gene-YKL164C_FaliES1 | rna-NM_001179730.1_FaliES1 | cds-NP_012757.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000006.2:139212-139897:- | gene-YKL164C_JAY291 | rna-NM_001179730.1_JAY291 | cds-NP_012757.1_JAY291 | 66.4 | 66.8 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:148331-149413:- | gene-YKL164C_MUCL30387 | rna-NM_001179730.1_MUCL30387 | cds-NP_012757.1_MUCL30387 | 94.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:142684-143766:- | gene-YKL164C_MUCL30388 | rna-NM_001179730.1_MUCL30388 | cds-NP_012757.1_MUCL30388 | 94.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:140685-141581:- | gene-YKL164C_MUCL39482 | rna-NM_001179730.1_MUCL39482 | cds-NP_012757.1_MUCL39482 | 87.2 | 87.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:145016-146041:- | gene-YKL164C_MUCL42920 | rna-NM_001179730.1_MUCL42920 | cds-NP_012757.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:141783-142808:- | gene-YKL164C_NCIM3186 | rna-NM_001179730.1_NCIM3186 | cds-NP_012757.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:140709-141719:- | gene-YKL164C_NCYC1407 | rna-NM_001179730.1_NCYC1407 | cds-NP_012757.1_NCYC1407 | 97.6 | 98.5 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:147767-148849:- | gene-YKL164C_PE2H3 | rna-NM_001179730.1_PE2H3 | cds-NP_012757.1_PE2H3 | 94.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:144061-145143:- | gene-YKL164C_PE2H4 | rna-NM_001179730.1_PE2H4 | cds-NP_012757.1_PE2H4 | 94.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:141794-142819:- | gene-YKL164C_S288C | rna-NM_001179730.1_S288C | cds-NP_012757.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:57991-59073:- | gene-YKL164C_SA1 | rna-NM_001179730.1_SA1 | cds-NP_012757.1_SA1 | 94.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:140945-141970:- | gene-YKL164C_ThermosaccDry | rna-NM_001179730.1_ThermosaccDry | cds-NP_012757.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:139470-140495:- | gene-YKL164C_VR1 | rna-NM_001179730.1_VR1 | cds-NP_012757.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:139683-140579:- | gene-YKL164C_ZTW1 | rna-NM_001179730.1_ZTW1 | cds-NP_012757.1_ZTW1 | 87.2 | 87.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:155087-156097:- | gene-YKL164C_Sparadoxus | rna-NM_001179730.1_Sparadoxus | cds-NP_012757.1_Sparadoxus | 89.5 | 98.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |