Gene name: PIM1
Reference locus (S288C): YBL022C
Gene biotype: protein_coding
Description: ATP-dependent Lon protease; involved in degradation of misfolded proteins in mitochondria; required for biogenesis and maintenance of mitochondria; Belongs to the peptidase S16 family
Top 10 interactors (score): YME1 (0.973); HSP60 (0.969); CHD1 (0.964); TSC13 (0.963); DST1 (0.962); AFG3 (0.955); MCX1 (0.945); YTA12 (0.929); MRX6 (0.901); MGE1 (0.898); MDJ1 (0.897); URA3 (0.844); ACO1 (0.844); SSC1 (0.829); HSP78 (0.807); SOD2 (0.773); HSP104 (0.769); PHB2 (0.757); COX6 (0.751); DNM1 (0.727)
Homologues (species, bitscore): LONP1 (Homo sapiens, 788.9); Lonp1 (Mus musculus, 794.7); lonp1 (Danio rerio, 784.3); LONP1 (Xenopus tropicalis, 798.5); Lon (Drosophila melanogaster, 773.5); C34B2.6 (Caenorhabditis elegans, 781.2); LON1 (Arabidopsis thaliana, 780.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:171484-174885:- | gene-YBL022C_AKU4011 | rna-NM_001178262.1_AKU4011 | cds-NP_009531.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:162312-165713:- | gene-YBL022C_BG1 | rna-NM_001178262.1_BG1 | cds-NP_009531.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:172070-175471:- | gene-YBL022C_Bruggeman | rna-NM_001178262.1_Bruggeman | cds-NP_009531.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:174681-178082:- | gene-YBL022C_CAT1 | rna-NM_001178262.1_CAT1 | cds-NP_009531.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:164039-167440:- | gene-YBL022C_CBS1585 | rna-NM_001178262.1_CBS1585 | cds-NP_009531.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:172494-175895:- | gene-YBL022C_CBS436 | rna-NM_001178262.1_CBS436 | cds-NP_009531.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:262818-266219:- | gene-YBL022C_CBS6412 | rna-NM_001178262.1_CBS6412 | cds-NP_009531.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:169609-173010:- | gene-YBL022C_CBS6413 | rna-NM_001178262.1_CBS6413 | cds-NP_009531.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:171639-175040:- | gene-YBL022C_CENPK1137D | rna-NM_001178262.1_CENPK1137D | cds-NP_009531.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:299026-302427:- | gene-YBL022C_EthanolRed | rna-NM_001178262.1_EthanolRed | cds-NP_009531.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:186292-189693:- | gene-YBL022C_FaliES1 | rna-NM_001178262.1_FaliES1 | cds-NP_009531.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000421.1:11963-15364:- | gene-YBL022C_JAY291 | rna-NM_001178262.1_JAY291 | cds-NP_009531.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:171927-175328:- | gene-YBL022C_MUCL30387 | rna-NM_001178262.1_MUCL30387 | cds-NP_009531.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:172969-176370:- | gene-YBL022C_MUCL30388 | rna-NM_001178262.1_MUCL30388 | cds-NP_009531.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:164224-167625:- | gene-YBL022C_MUCL39482 | rna-NM_001178262.1_MUCL39482 | cds-NP_009531.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:171499-174900:- | gene-YBL022C_MUCL42920 | rna-NM_001178262.1_MUCL42920 | cds-NP_009531.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:177671-181072:- | gene-YBL022C_NCIM3186 | rna-NM_001178262.1_NCIM3186 | cds-NP_009531.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:165373-168774:- | gene-YBL022C_NCYC1407 | rna-NM_001178262.1_NCYC1407 | cds-NP_009531.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:171600-175001:- | gene-YBL022C_PE2H3 | rna-NM_001178262.1_PE2H3 | cds-NP_009531.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:169244-172645:- | gene-YBL022C_PE2H4 | rna-NM_001178262.1_PE2H4 | cds-NP_009531.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:177874-181275:- | gene-YBL022C_S288C | rna-NM_001178262.1_S288C | cds-NP_009531.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000051.1:62595-65996:- | gene-YBL022C_SA1 | rna-NM_001178262.1_SA1 | cds-NP_009531.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:186247-189648:- | gene-YBL022C_ThermosaccDry | rna-NM_001178262.1_ThermosaccDry | cds-NP_009531.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:168413-171814:- | gene-YBL022C_VR1 | rna-NM_001178262.1_VR1 | cds-NP_009531.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:162959-166360:- | gene-YBL022C_ZTW1 | rna-NM_001178262.1_ZTW1 | cds-NP_009531.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:197900-201301:- | gene-YBL022C_Sparadoxus | rna-NM_001178262.1_Sparadoxus | cds-NP_009531.1_Sparadoxus | 90.7 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |