Gene name: PHO85
Reference locus (S288C): YPL031C
Gene biotype: protein_coding
Description: Cyclin-dependent kinase; has ten cyclin partners; involved in regulating the cellular response to nutrient levels and environmental conditions and progression through the cell cycle; human lissencephaly-associated homolog CDK5 functionally complements null mutation
Top 10 interactors (score): PCL1 (0.999); PHO4 (0.999); PCL8 (0.999); CKS1 (0.999); PCL6 (0.999); PHO81 (0.999); PCL10 (0.999); PHO80 (0.999); PCL5 (0.998); PCL7 (0.997); POL30 (0.996); CLB1 (0.996); PCL2 (0.995); CDC6 (0.994); MIH1 (0.993); PCL9 (0.991); GCN4 (0.985); SWE1 (0.984); CLN2 (0.983); CLB2 (0.981)
Homologues (species, bitscore): CDK2 (Homo sapiens, 342.4); Cdk5 (Mus musculus, 331.3); cdk2 (Danio rerio, 348.6); cdk16 (Xenopus tropicalis, 317.4); Cdk5 (Drosophila melanogaster, 312.4); cdk-5 (Caenorhabditis elegans, 316.2); CDC2 (Arabidopsis thaliana, 316.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:463510-464529:- | gene-YPL031C_AKU4011 | rna-NM_001183845.1_AKU4011 | cds-NP_015294.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:432851-433870:+ | gene-YPL031C_BG1 | rna-NM_001183845.1_BG1 | cds-NP_015294.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:540471-541490:- | gene-YPL031C_Bruggeman | rna-NM_001183845.1_Bruggeman | cds-NP_015294.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:580151-581170:- | gene-YPL031C_CAT1 | rna-NM_001183845.1_CAT1 | cds-NP_015294.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:467580-468599:- | gene-YPL031C_CBS1585 | rna-NM_001183845.1_CBS1585 | cds-NP_015294.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:481718-482737:- | gene-YPL031C_CBS436 | rna-NM_001183845.1_CBS436 | cds-NP_015294.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:471772-472791:- | gene-YPL031C_CBS6412 | rna-NM_001183845.1_CBS6412 | cds-NP_015294.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:464132-465151:- | gene-YPL031C_CBS6413 | rna-NM_001183845.1_CBS6413 | cds-NP_015294.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:491986-493005:- | gene-YPL031C_CENPK1137D | rna-NM_001183845.1_CENPK1137D | cds-NP_015294.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:461870-462889:- | gene-YPL031C_EthanolRed | rna-NM_001183845.1_EthanolRed | cds-NP_015294.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:469700-470719:- | gene-YPL031C_FaliES1 | rna-NM_001183845.1_FaliES1 | cds-NP_015294.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000283.1:78307-79326:- | gene-YPL031C_JAY291 | rna-NM_001183845.1_JAY291 | cds-NP_015294.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:481419-482438:- | gene-YPL031C_MUCL30387 | rna-NM_001183845.1_MUCL30387 | cds-NP_015294.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:480527-481546:- | gene-YPL031C_MUCL30388 | rna-NM_001183845.1_MUCL30388 | cds-NP_015294.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:460896-461915:- | gene-YPL031C_MUCL39482 | rna-NM_001183845.1_MUCL39482 | cds-NP_015294.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:519522-520541:- | gene-YPL031C_MUCL42920 | rna-NM_001183845.1_MUCL42920 | cds-NP_015294.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:492001-493020:- | gene-YPL031C_NCIM3186 | rna-NM_001183845.1_NCIM3186 | cds-NP_015294.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:468174-469193:- | gene-YPL031C_NCYC1407 | rna-NM_001183845.1_NCYC1407 | cds-NP_015294.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:474820-475839:- | gene-YPL031C_PE2H3 | rna-NM_001183845.1_PE2H3 | cds-NP_015294.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:474435-475454:- | gene-YPL031C_PE2H4 | rna-NM_001183845.1_PE2H4 | cds-NP_015294.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:492018-493037:- | gene-YPL031C_S288C | rna-NM_001183845.1_S288C | cds-NP_015294.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000029.1:34876-35895:- | gene-YPL031C_SA1 | rna-NM_001183845.1_SA1 | cds-NP_015294.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:469499-470518:- | gene-YPL031C_ThermosaccDry | rna-NM_001183845.1_ThermosaccDry | cds-NP_015294.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:484398-485417:- | gene-YPL031C_VR1 | rna-NM_001183845.1_VR1 | cds-NP_015294.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:468791-469810:- | gene-YPL031C_ZTW1 | rna-NM_001183845.1_ZTW1 | cds-NP_015294.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:468766-469786:- | gene-YPL031C_Sparadoxus | rna-NM_001183845.1_Sparadoxus | cds-NP_015294.1_Sparadoxus | 92.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |