Gene name: PHO2
Reference locus (S288C): YDL106C
Gene biotype: protein_coding
Description: Regulatory protein PHO2; Homeobox transcription factor; regulatory targets include genes involved in phosphate metabolism; binds cooperatively with Pho4p to the PHO5 promoter; phosphorylation of Pho2p facilitates interaction with Pho4p; relocalizes to the cytosol in response to hypoxia
Top 10 interactors (score): BAS1 (0.995); PHO4 (0.995); SWI5 (0.853); ADE13 (0.819); PHO80 (0.812); HIS1 (0.808); ADE2 (0.787); ADE5,7 (0.786); HIS4 (0.78); GCN4 (0.767); PHO85 (0.711); ADE4 (0.691); PHO81 (0.67); ADE17 (0.66); FUR1 (0.642); URK1 (0.642); DAS2 (0.642); ADE16 (0.589); SAS2 (0.57); SAS3 (0.57)
Homologues (species, bitscore): DMBX1 (Homo sapiens, 56.6); Dmbx1 (Mus musculus, 56.6); dmbx1a (Danio rerio, 61.6); dmbx1 (Xenopus tropicalis, 61.6); hbn (Drosophila melanogaster, 64.3); ceh-54 (Caenorhabditis elegans, 54.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:254849-256525:- | gene-YDL106C_AKU4011 | rna-NM_001180165.1_AKU4011 | cds-NP_010177.1_AKU4011 | 99.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:293426-295102:+ | gene-YDL106C_BG1 | rna-NM_001180165.1_BG1 | cds-NP_010177.1_BG1 | 99.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:272259-273935:- | gene-YDL106C_Bruggeman | rna-NM_001180165.1_Bruggeman | cds-NP_010177.1_Bruggeman | 99.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:269000-270676:- | gene-YDL106C_CAT1 | rna-NM_001180165.1_CAT1 | cds-NP_010177.1_CAT1 | 99.0 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:253109-254785:- | gene-YDL106C_CBS1585 | rna-NM_001180165.1_CBS1585 | cds-NP_010177.1_CBS1585 | 99.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:269769-271445:- | gene-YDL106C_CBS436 | rna-NM_001180165.1_CBS436 | cds-NP_010177.1_CBS436 | 99.5 | 99.8 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:251535-253211:- | gene-YDL106C_CBS6412 | rna-NM_001180165.1_CBS6412 | cds-NP_010177.1_CBS6412 | 99.4 | 99.8 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:271270-272946:- | gene-YDL106C_CBS6413 | rna-NM_001180165.1_CBS6413 | cds-NP_010177.1_CBS6413 | 99.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:268994-270670:- | gene-YDL106C_CENPK1137D | rna-NM_001180165.1_CENPK1137D | cds-NP_010177.1_CENPK1137D | 99.2 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:265875-267551:- | gene-YDL106C_EthanolRed | rna-NM_001180165.1_EthanolRed | cds-NP_010177.1_EthanolRed | 99.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:271845-273521:- | gene-YDL106C_FaliES1 | rna-NM_001180165.1_FaliES1 | cds-NP_010177.1_FaliES1 | 99.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000010.1:41889-43565:- | gene-YDL106C_JAY291 | rna-NM_001180165.1_JAY291 | cds-NP_010177.1_JAY291 | 99.1 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:270045-271721:- | gene-YDL106C_MUCL30387 | rna-NM_001180165.1_MUCL30387 | cds-NP_010177.1_MUCL30387 | 99.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:260804-262480:- | gene-YDL106C_MUCL30388 | rna-NM_001180165.1_MUCL30388 | cds-NP_010177.1_MUCL30388 | 99.3 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:254215-255891:- | gene-YDL106C_MUCL39482 | rna-NM_001180165.1_MUCL39482 | cds-NP_010177.1_MUCL39482 | 99.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:175999-177648:- | gene-YDL106C_MUCL42920 | rna-NM_001180165.1_MUCL42920 | cds-NP_010177.1_MUCL42920 | 97.7 | 98.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:270145-271824:- | gene-YDL106C_NCIM3186 | rna-NM_001180165.1_NCIM3186 | cds-NP_010177.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:254243-255919:- | gene-YDL106C_NCYC1407 | rna-NM_001180165.1_NCYC1407 | cds-NP_010177.1_NCYC1407 | 99.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:261000-262676:- | gene-YDL106C_PE2H3 | rna-NM_001180165.1_PE2H3 | cds-NP_010177.1_PE2H3 | 99.1 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:261004-262680:- | gene-YDL106C_PE2H4 | rna-NM_001180165.1_PE2H4 | cds-NP_010177.1_PE2H4 | 99.1 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:270222-271901:- | gene-YDL106C_S288C | rna-NM_001180165.1_S288C | cds-NP_010177.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000010.1:163016-164692:+ | gene-YDL106C_SA1 | rna-NM_001180165.1_SA1 | cds-NP_010177.1_SA1 | 99.1 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:271356-273032:- | gene-YDL106C_ThermosaccDry | rna-NM_001180165.1_ThermosaccDry | cds-NP_010177.1_ThermosaccDry | 99.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:273462-275138:- | gene-YDL106C_VR1 | rna-NM_001180165.1_VR1 | cds-NP_010177.1_VR1 | 99.1 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:269279-270955:- | gene-YDL106C_ZTW1 | rna-NM_001180165.1_ZTW1 | cds-NP_010177.1_ZTW1 | 99.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:271429-273087:- | gene-YDL106C_Sparadoxus | rna-NM_001180165.1_Sparadoxus | cds-NP_010177.1_Sparadoxus | 90.3 | 98.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |