PHM7 (YOL084W)


Gene profile

Gene name: PHM7
Reference locus (S288C): YOL084W
Gene biotype: protein_coding

Description: Calcium permeable stress-gated cation channel; Phosphate metabolism protein 7; Protein of unknown function; expression is regulated by phosphate levels; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery and vacuole; protein abundance increases in response to DNA replication stress

Top 10 interactors (score): RTN2 (0.977); CTT1 (0.949); HBT1 (0.929); YNL195C (0.928); MSC1 (0.924); TKL2 (0.919); FMP45 (0.919); NQM1 (0.915); YNL194C (0.913); ALD3 (0.908); SOL4 (0.881); DDR2 (0.864); HXT5 (0.861); XBP1 (0.848); YBR116C (0.836); TEX1 (0.813); GRE1 (0.809); GPG1 (0.756); YSW1 (0.745); ATG34 (0.735)

Homologues (species, bitscore): TMEM63B (Homo sapiens, 61.2); Tmem63b (Mus musculus, 60.1); TMEM63C (Danio rerio, 68.2); tmem63c (Xenopus tropicalis, 72.4); CG11210 (Drosophila melanogaster, 76.3); AT3G21620 (Arabidopsis thaliana, 154.1)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:145950-148925:+ gene-YOL084W_AKU4011 rna-NM_001183338.1_AKU4011 cds-NP_014557.1_AKU4011 99.8 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000172.1:110806-113781:+ gene-YOL084W_BG1 rna-NM_001183338.1_BG1 cds-NP_014557.1_BG1 99.2 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:147253-150228:+ gene-YOL084W_Bruggeman rna-NM_001183338.1_Bruggeman cds-NP_014557.1_Bruggeman 99.7 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:146577-149552:+ gene-YOL084W_CAT1 rna-NM_001183338.1_CAT1 cds-NP_014557.1_CAT1 99.3 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:140360-143335:+ gene-YOL084W_CBS1585 rna-NM_001183338.1_CBS1585 cds-NP_014557.1_CBS1585 99.7 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:145576-148551:+ gene-YOL084W_CBS436 rna-NM_001183338.1_CBS436 cds-NP_014557.1_CBS436 99.0 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005341.1:140265-143240:+ gene-YOL084W_CBS6412 rna-NM_001183338.1_CBS6412 cds-NP_014557.1_CBS6412 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:147223-150198:+ gene-YOL084W_CBS6413 rna-NM_001183338.1_CBS6413 cds-NP_014557.1_CBS6413 99.7 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:162110-165085:+ gene-YOL084W_CENPK1137D rna-NM_001183338.1_CENPK1137D cds-NP_014557.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:143276-146251:+ gene-YOL084W_EthanolRed rna-NM_001183338.1_EthanolRed cds-NP_014557.1_EthanolRed 99.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:145603-148578:+ gene-YOL084W_FaliES1 rna-NM_001183338.1_FaliES1 cds-NP_014557.1_FaliES1 99.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000018.1:116925-119900:- gene-YOL084W_JAY291 rna-NM_001183338.1_JAY291 cds-NP_014557.1_JAY291 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:151455-154430:+ gene-YOL084W_MUCL30387 rna-NM_001183338.1_MUCL30387 cds-NP_014557.1_MUCL30387 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:155131-158106:+ gene-YOL084W_MUCL30388 rna-NM_001183338.1_MUCL30388 cds-NP_014557.1_MUCL30388 99.7 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:148281-151256:+ gene-YOL084W_MUCL39482 rna-NM_001183338.1_MUCL39482 cds-NP_014557.1_MUCL39482 99.7 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:163803-166778:+ gene-YOL084W_MUCL42920 rna-NM_001183338.1_MUCL42920 cds-NP_014557.1_MUCL42920 99.7 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:162245-165220:+ gene-YOL084W_NCIM3186 rna-NM_001183338.1_NCIM3186 cds-NP_014557.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:154878-157853:+ gene-YOL084W_NCYC1407 rna-NM_001183338.1_NCYC1407 cds-NP_014557.1_NCYC1407 99.8 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:137924-140899:+ gene-YOL084W_PE2H3 rna-NM_001183338.1_PE2H3 cds-NP_014557.1_PE2H3 99.5 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:148913-151888:+ gene-YOL084W_PE2H4 rna-NM_001183338.1_PE2H4 cds-NP_014557.1_PE2H4 99.0 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:162356-165331:+ gene-YOL084W_S288C rna-NM_001183338.1_S288C cds-NP_014557.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000001.1:130236-133211:+ gene-YOL084W_SA1 rna-NM_001183338.1_SA1 cds-NP_014557.1_SA1 99.6 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:144611-147586:+ gene-YOL084W_ThermosaccDry rna-NM_001183338.1_ThermosaccDry cds-NP_014557.1_ThermosaccDry 99.6 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:145180-148155:+ gene-YOL084W_VR1 rna-NM_001183338.1_VR1 cds-NP_014557.1_VR1 98.9 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000031.1:144307-147282:+ gene-YOL084W_ZTW1 rna-NM_001183338.1_ZTW1 cds-NP_014557.1_ZTW1 99.6 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:147795-150776:+ gene-YOL084W_Sparadoxus rna-NM_001183338.1_Sparadoxus cds-NP_014557.1_Sparadoxus 88.3 99.7 Verified 1 1 0 False False True False False

Additional files