Gene name: PHA2
Reference locus (S288C): YNL316C
Gene biotype: protein_coding
Description: Putative prephenate dehydratase; Prephenate dehydratase; catalyzes the conversion of prephanate to phenylpyruvate, which is a step in the phenylalanine biosynthesis pathway
Top 10 interactors (score): ARO7 (0.997); TYR1 (0.993); ARO8 (0.986); ARO9 (0.975); TRP3 (0.973); HIS5 (0.96); TRP5 (0.951); AAT1 (0.944); AAT2 (0.944); ARO2 (0.942); TRP4 (0.883); ARO3 (0.869); ARO1 (0.853); TRP2 (0.818); ARO4 (0.785); ARG5,6 (0.78); OSW2 (0.748); ASN1 (0.729); PRO3 (0.723); ABZ1 (0.706)
Homologues (species, bitscore): ADT2 (Arabidopsis thaliana, 80.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:35873-36877:- | gene-YNL316C_AKU4011 | rna-NM_001183154.1_AKU4011 | cds-NP_014083.2_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000074.1:53761-54765:+ | gene-YNL316C_BG1 | rna-NM_001183154.1_BG1 | cds-NP_014083.2_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:45213-46217:- | gene-YNL316C_Bruggeman | rna-NM_001183154.1_Bruggeman | cds-NP_014083.2_Bruggeman | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:47836-48840:- | gene-YNL316C_CAT1 | rna-NM_001183154.1_CAT1 | cds-NP_014083.2_CAT1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:36207-37211:- | gene-YNL316C_CBS1585 | rna-NM_001183154.1_CBS1585 | cds-NP_014083.2_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:36700-37704:- | gene-YNL316C_CBS436 | rna-NM_001183154.1_CBS436 | cds-NP_014083.2_CBS436 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:32864-33868:- | gene-YNL316C_CBS6412 | rna-NM_001183154.1_CBS6412 | cds-NP_014083.2_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:33053-34057:- | gene-YNL316C_CBS6413 | rna-NM_001183154.1_CBS6413 | cds-NP_014083.2_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:35898-36902:- | gene-YNL316C_CENPK1137D | rna-NM_001183154.1_CENPK1137D | cds-NP_014083.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:32899-33903:- | gene-YNL316C_EthanolRed | rna-NM_001183154.1_EthanolRed | cds-NP_014083.2_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:33798-34802:- | gene-YNL316C_FaliES1 | rna-NM_001183154.1_FaliES1 | cds-NP_014083.2_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000390.1:20716-21720:+ | gene-YNL316C_JAY291 | rna-NM_001183154.1_JAY291 | cds-NP_014083.2_JAY291 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:45471-46475:- | gene-YNL316C_MUCL30387 | rna-NM_001183154.1_MUCL30387 | cds-NP_014083.2_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:38499-39503:- | gene-YNL316C_MUCL30388 | rna-NM_001183154.1_MUCL30388 | cds-NP_014083.2_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:33841-34845:- | gene-YNL316C_MUCL39482 | rna-NM_001183154.1_MUCL39482 | cds-NP_014083.2_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:35534-36538:- | gene-YNL316C_MUCL42920 | rna-NM_001183154.1_MUCL42920 | cds-NP_014083.2_MUCL42920 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:42040-43044:- | gene-YNL316C_NCIM3186 | rna-NM_001183154.1_NCIM3186 | cds-NP_014083.2_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:35173-36177:- | gene-YNL316C_NCYC1407 | rna-NM_001183154.1_NCYC1407 | cds-NP_014083.2_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:32378-33382:- | gene-YNL316C_PE2H3 | rna-NM_001183154.1_PE2H3 | cds-NP_014083.2_PE2H3 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:31766-32770:- | gene-YNL316C_PE2H4 | rna-NM_001183154.1_PE2H4 | cds-NP_014083.2_PE2H4 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:42071-43075:- | gene-YNL316C_S288C | rna-NM_001183154.1_S288C | cds-NP_014083.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000052.1:54140-55144:+ | gene-YNL316C_SA1 | rna-NM_001183154.1_SA1 | cds-NP_014083.2_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:34655-35659:- | gene-YNL316C_ThermosaccDry | rna-NM_001183154.1_ThermosaccDry | cds-NP_014083.2_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:47193-48197:- | gene-YNL316C_VR1 | rna-NM_001183154.1_VR1 | cds-NP_014083.2_VR1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000029.1:25864-26868:- | gene-YNL316C_ZTW1 | rna-NM_001183154.1_ZTW1 | cds-NP_014083.2_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:43844-44848:- | gene-YNL316C_Sparadoxus | rna-NM_001183154.1_Sparadoxus | cds-NP_014083.2_Sparadoxus | 87.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |