Gene name: PGS1
Reference locus (S288C): YCL004W
Gene biotype: protein_coding
Description: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Phosphatidylglycerolphosphate synthase; catalyzes the synthesis of phosphatidylglycerolphosphate from CDP-diacylglycerol and sn-glycerol 3-phosphate in the first committed and rate-limiting step of cardiolipin biosynthesis
Top 10 interactors (score): CRD1 (0.996); CHO1 (0.995); CDS1 (0.989); PIS1 (0.989); GEP4 (0.989); PSD1 (0.968); TAM41 (0.968); CHO2 (0.896); UPS1 (0.842); TAZ1 (0.827); CLD1 (0.814); PSD2 (0.813); EPT1 (0.782); ECT1 (0.779); PCT1 (0.776); UPS2 (0.774); GPT2 (0.747); AYR1 (0.747); EKI1 (0.736); ALE1 (0.733)
Homologues (species, bitscore): PGS1 (Homo sapiens, 241.1); Pgs1 (Mus musculus, 241.5); pgs1 (Danio rerio, 198.4); pgs1 (Xenopus tropicalis, 238.4); CG7718 (Drosophila melanogaster, 240.7); pgs-1 (Caenorhabditis elegans, 206.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:103822-105387:+ | gene-YCL004W_AKU4011 | rna-NM_001178653.1_AKU4011 | cds-NP_009923.2_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000178.1:40646-42211:- | gene-YCL004W_BG1 | rna-NM_001178653.1_BG1 | cds-NP_009923.2_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:98407-99972:+ | gene-YCL004W_Bruggeman | rna-NM_001178653.1_Bruggeman | cds-NP_009923.2_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:103557-105122:+ | gene-YCL004W_CAT1 | rna-NM_001178653.1_CAT1 | cds-NP_009923.2_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:104472-106037:+ | gene-YCL004W_CBS1585 | rna-NM_001178653.1_CBS1585 | cds-NP_009923.2_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:109388-110953:+ | gene-YCL004W_CBS436 | rna-NM_001178653.1_CBS436 | cds-NP_009923.2_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:91931-93496:+ | gene-YCL004W_CBS6412 | rna-NM_001178653.1_CBS6412 | cds-NP_009923.2_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:103779-105344:+ | gene-YCL004W_CBS6413 | rna-NM_001178653.1_CBS6413 | cds-NP_009923.2_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:108580-110145:+ | gene-YCL004W_CENPK1137D | rna-NM_001178653.1_CENPK1137D | cds-NP_009923.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:101841-103406:+ | gene-YCL004W_EthanolRed | rna-NM_001178653.1_EthanolRed | cds-NP_009923.2_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:104134-105699:+ | gene-YCL004W_FaliES1 | rna-NM_001178653.1_FaliES1 | cds-NP_009923.2_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000126.1:18303-19868:+ | gene-YCL004W_JAY291 | rna-NM_001178653.1_JAY291 | cds-NP_009923.2_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:96842-98410:+ | gene-YCL004W_MUCL30387 | rna-NM_001178653.1_MUCL30387 | cds-NP_009923.2_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:96398-97966:+ | gene-YCL004W_MUCL30388 | rna-NM_001178653.1_MUCL30388 | cds-NP_009923.2_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:104889-106454:+ | gene-YCL004W_MUCL39482 | rna-NM_001178653.1_MUCL39482 | cds-NP_009923.2_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:100121-101686:+ | gene-YCL004W_MUCL42920 | rna-NM_001178653.1_MUCL42920 | cds-NP_009923.2_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:108737-110302:+ | gene-YCL004W_NCIM3186 | rna-NM_001178653.1_NCIM3186 | cds-NP_009923.2_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:105371-106936:+ | gene-YCL004W_NCYC1407 | rna-NM_001178653.1_NCYC1407 | cds-NP_009923.2_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:109540-111105:+ | gene-YCL004W_PE2H3 | rna-NM_001178653.1_PE2H3 | cds-NP_009923.2_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:109498-111063:+ | gene-YCL004W_PE2H4 | rna-NM_001178653.1_PE2H4 | cds-NP_009923.2_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:109105-110670:+ | gene-YCL004W_S288C | rna-NM_001178653.1_S288C | cds-NP_009923.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000073.1:40664-42229:- | gene-YCL004W_SA1 | rna-NM_001178653.1_SA1 | cds-NP_009923.2_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:104707-106272:+ | gene-YCL004W_ThermosaccDry | rna-NM_001178653.1_ThermosaccDry | cds-NP_009923.2_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:115347-116912:+ | gene-YCL004W_VR1 | rna-NM_001178653.1_VR1 | cds-NP_009923.2_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:103646-105211:+ | gene-YCL004W_ZTW1 | rna-NM_001178653.1_ZTW1 | cds-NP_009923.2_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:133886-135451:+ | gene-YCL004W_Sparadoxus | rna-NM_001178653.1_Sparadoxus | cds-NP_009923.2_Sparadoxus | 90.3 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |