Gene name: PGM2
Reference locus (S288C): YMR105C
Gene biotype: protein_coding
Description: Phosphoglucomutase; catalyzes the conversion from glucose-1-phosphate to glucose-6-phosphate, which is a key step in hexose metabolism; functions as the acceptor for a Glc-phosphotransferase; protein abundance increases in response to DNA replication stress; PGM2 has a paralog, PGM1, that arose from the whole genome duplication
Top 10 interactors (score): UGP1 (0.999); GPH1 (0.999); GLC3 (0.998); PGI1 (0.998); GDB1 (0.997); TPI1 (0.996); HXK1 (0.995); GLK1 (0.995); GSY2 (0.994); PRM15 (0.992); GAL7 (0.989); NTH1 (0.986); EMI2 (0.985); PGM1 (0.983); GSY1 (0.982); TPS1 (0.979); TSL1 (0.976); GCY1 (0.975); GAD1 (0.974); NQM1 (0.973)
Homologues (species, bitscore): PGM1 (Homo sapiens, 553.5); Pgm2 (Mus musculus, 558.5); pgm1 (Danio rerio, 544.3); pgm5 (Xenopus tropicalis, 495.7); Pgm (Drosophila melanogaster, 539.7); R05F9.6 (Caenorhabditis elegans, 525.0); PGM2 (Arabidopsis thaliana, 528.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:513845-515554:- | gene-YMR105C_AKU4011 | rna-NM_001182605.1_AKU4011 | cds-NP_013823.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:27400-29109:+ | gene-YMR105C_BG1 | rna-NM_001182605.1_BG1 | cds-NP_013823.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:456269-457978:- | gene-YMR105C_Bruggeman | rna-NM_001182605.1_Bruggeman | cds-NP_013823.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:456590-458299:- | gene-YMR105C_CAT1 | rna-NM_001182605.1_CAT1 | cds-NP_013823.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:446790-448499:- | gene-YMR105C_CBS1585 | rna-NM_001182605.1_CBS1585 | cds-NP_013823.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:452103-453812:- | gene-YMR105C_CBS436 | rna-NM_001182605.1_CBS436 | cds-NP_013823.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:559888-561597:- | gene-YMR105C_CBS6412 | rna-NM_001182605.1_CBS6412 | cds-NP_013823.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:446049-447758:- | gene-YMR105C_CBS6413 | rna-NM_001182605.1_CBS6413 | cds-NP_013823.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:470006-471715:- | gene-YMR105C_CENPK1137D | rna-NM_001182605.1_CENPK1137D | cds-NP_013823.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:446675-448384:- | gene-YMR105C_EthanolRed | rna-NM_001182605.1_EthanolRed | cds-NP_013823.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:449820-451529:- | gene-YMR105C_FaliES1 | rna-NM_001182605.1_FaliES1 | cds-NP_013823.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000349.1:12652-14361:- | gene-YMR105C_JAY291 | rna-NM_001182605.1_JAY291 | cds-NP_013823.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:453189-454898:- | gene-YMR105C_MUCL30387 | rna-NM_001182605.1_MUCL30387 | cds-NP_013823.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:457179-458888:- | gene-YMR105C_MUCL30388 | rna-NM_001182605.1_MUCL30388 | cds-NP_013823.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:447087-448796:- | gene-YMR105C_MUCL39482 | rna-NM_001182605.1_MUCL39482 | cds-NP_013823.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:453758-455467:- | gene-YMR105C_MUCL42920 | rna-NM_001182605.1_MUCL42920 | cds-NP_013823.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:475851-477560:- | gene-YMR105C_NCIM3186 | rna-NM_001182605.1_NCIM3186 | cds-NP_013823.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:446984-448693:- | gene-YMR105C_NCYC1407 | rna-NM_001182605.1_NCYC1407 | cds-NP_013823.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:452701-454410:- | gene-YMR105C_PE2H3 | rna-NM_001182605.1_PE2H3 | cds-NP_013823.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:458796-460505:- | gene-YMR105C_PE2H4 | rna-NM_001182605.1_PE2H4 | cds-NP_013823.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:475897-477606:- | gene-YMR105C_S288C | rna-NM_001182605.1_S288C | cds-NP_013823.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:72391-74100:+ | gene-YMR105C_SA1 | rna-NM_001182605.1_SA1 | cds-NP_013823.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:447642-449351:- | gene-YMR105C_ThermosaccDry | rna-NM_001182605.1_ThermosaccDry | cds-NP_013823.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:459287-460996:- | gene-YMR105C_VR1 | rna-NM_001182605.1_VR1 | cds-NP_013823.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:423924-425633:- | gene-YMR105C_ZTW1 | rna-NM_001182605.1_ZTW1 | cds-NP_013823.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:460149-461858:- | gene-YMR105C_Sparadoxus | rna-NM_001182605.1_Sparadoxus | cds-NP_013823.1_Sparadoxus | 92.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |