Gene name: PGM1
Reference locus (S288C): YKL127W
Gene biotype: protein_coding
Description: Phosphoglucomutase, minor isoform; catalyzes the conversion from glucose-1-phosphate to glucose-6-phosphate, which is a key step in hexose metabolism; PGM1 has a paralog, PGM2, that arose from the whole genome duplication
Top 10 interactors (score): GPH1 (0.998); TPI1 (0.997); PGI1 (0.997); PRM15 (0.995); GAL7 (0.987); PGM2 (0.983); UGP1 (0.978); ZWF1 (0.971); YHL012W (0.963); TKL2 (0.96); PGK1 (0.957); GDB1 (0.95); GLC3 (0.947); TKL1 (0.947); RKI1 (0.944); NQM1 (0.944); FBA1 (0.934); RBK1 (0.931); TAL1 (0.927); PCM1 (0.913)
Homologues (species, bitscore): PGM1 (Homo sapiens, 532.3); Pgm2 (Mus musculus, 535.4); pgm1 (Danio rerio, 504.2); pgm5 (Xenopus tropicalis, 462.2); Pgm (Drosophila melanogaster, 529.6); R05F9.6 (Caenorhabditis elegans, 492.3); PGM2 (Arabidopsis thaliana, 494.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:190116-191828:+ | gene-YKL127W_AKU4011 | rna-NM_001179693.1_AKU4011 | cds-NP_012795.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:167235-168947:+ | gene-YKL127W_BG1 | rna-NM_001179693.1_BG1 | cds-NP_012795.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:208027-209739:+ | gene-YKL127W_Bruggeman | rna-NM_001179693.1_Bruggeman | cds-NP_012795.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:203081-204793:+ | gene-YKL127W_CAT1 | rna-NM_001179693.1_CAT1 | cds-NP_012795.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:202349-204061:+ | gene-YKL127W_CBS1585 | rna-NM_001179693.1_CBS1585 | cds-NP_012795.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:200933-202645:+ | gene-YKL127W_CBS436 | rna-NM_001179693.1_CBS436 | cds-NP_012795.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:186976-188688:+ | gene-YKL127W_CBS6412 | rna-NM_001179693.1_CBS6412 | cds-NP_012795.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:202812-204524:+ | gene-YKL127W_CBS6413 | rna-NM_001179693.1_CBS6413 | cds-NP_012795.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:203182-204894:+ | gene-YKL127W_CENPK1137D | rna-NM_001179693.1_CENPK1137D | cds-NP_012795.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:200847-202559:+ | gene-YKL127W_EthanolRed | rna-NM_001179693.1_EthanolRed | cds-NP_012795.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:201660-203372:+ | gene-YKL127W_FaliES1 | rna-NM_001179693.1_FaliES1 | cds-NP_012795.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000357.1:23954-25666:+ | gene-YKL127W_JAY291 | rna-NM_001179693.1_JAY291 | cds-NP_012795.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:209853-211565:+ | gene-YKL127W_MUCL30387 | rna-NM_001179693.1_MUCL30387 | cds-NP_012795.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:204219-205931:+ | gene-YKL127W_MUCL30388 | rna-NM_001179693.1_MUCL30388 | cds-NP_012795.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:202142-203854:+ | gene-YKL127W_MUCL39482 | rna-NM_001179693.1_MUCL39482 | cds-NP_012795.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:206514-208226:+ | gene-YKL127W_MUCL42920 | rna-NM_001179693.1_MUCL42920 | cds-NP_012795.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:203530-205242:+ | gene-YKL127W_NCIM3186 | rna-NM_001179693.1_NCIM3186 | cds-NP_012795.1_NCIM3186 | 91.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:202323-204035:+ | gene-YKL127W_NCYC1407 | rna-NM_001179693.1_NCYC1407 | cds-NP_012795.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:209421-211133:+ | gene-YKL127W_PE2H3 | rna-NM_001179693.1_PE2H3 | cds-NP_012795.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:205709-207421:+ | gene-YKL127W_PE2H4 | rna-NM_001179693.1_PE2H4 | cds-NP_012795.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:203541-205253:+ | gene-YKL127W_S288C | rna-NM_001179693.1_S288C | cds-NP_012795.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:119661-121373:+ | gene-YKL127W_SA1 | rna-NM_001179693.1_SA1 | cds-NP_012795.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:202360-204072:+ | gene-YKL127W_ThermosaccDry | rna-NM_001179693.1_ThermosaccDry | cds-NP_012795.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:201672-203384:+ | gene-YKL127W_VR1 | rna-NM_001179693.1_VR1 | cds-NP_012795.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:200893-202605:+ | gene-YKL127W_ZTW1 | rna-NM_001179693.1_ZTW1 | cds-NP_012795.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:218426-220138:+ | gene-YKL127W_Sparadoxus | rna-NM_001179693.1_Sparadoxus | cds-NP_012795.1_Sparadoxus | 89.9 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |