Gene name: PGK1
Reference locus (S288C): YCR012W
Gene biotype: protein_coding
Description: 3-phosphoglycerate kinase; catalyzes transfer of high-energy phosphoryl groups from the acyl phosphate of 1,3-bisphosphoglycerate to ADP to produce ATP; key enzyme in glycolysis and gluconeogenesis
Top 10 interactors (score): GPM1 (0.999); TPI1 (0.999); TDH1 (0.999); TDH2 (0.999); ENO1 (0.999); TDH3 (0.999); PGI1 (0.999); FBA1 (0.998); ENO2 (0.998); CDC19 (0.998); ADH1 (0.993); TEF1 (0.989); YOR283W (0.989); GPM2 (0.987); GND1 (0.983); ACT1 (0.98); GND2 (0.979); SEC4 (0.978); GPM3 (0.973); PYK2 (0.97)
Homologues (species, bitscore): PGK1 (Homo sapiens, 545.0); Pgk1 (Mus musculus, 537.7); pgk1 (Danio rerio, 530.8); pgk1 (Xenopus tropicalis, 528.1); Pgk (Drosophila melanogaster, 513.1); pgk-1 (Caenorhabditis elegans, 560.8); PGK1 (Arabidopsis thaliana, 383.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:132120-133370:+ | gene-YCR012W_AKU4011 | rna-NM_001178725.1_AKU4011 | cds-NP_009938.2_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000178.1:12636-13886:- | gene-YCR012W_BG1 | rna-NM_001178725.1_BG1 | cds-NP_009938.2_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:127932-129182:+ | gene-YCR012W_Bruggeman | rna-NM_001178725.1_Bruggeman | cds-NP_009938.2_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:138334-139584:+ | gene-YCR012W_CAT1 | rna-NM_001178725.1_CAT1 | cds-NP_009938.2_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:132770-134020:+ | gene-YCR012W_CBS1585 | rna-NM_001178725.1_CBS1585 | cds-NP_009938.2_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:138029-139279:+ | gene-YCR012W_CBS436 | rna-NM_001178725.1_CBS436 | cds-NP_009938.2_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:120230-121480:+ | gene-YCR012W_CBS6412 | rna-NM_001178725.1_CBS6412 | cds-NP_009938.2_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:132077-133327:+ | gene-YCR012W_CBS6413 | rna-NM_001178725.1_CBS6413 | cds-NP_009938.2_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:143224-144474:+ | gene-YCR012W_CENPK1137D | rna-NM_001178725.1_CENPK1137D | cds-NP_009938.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:130138-131388:+ | gene-YCR012W_EthanolRed | rna-NM_001178725.1_EthanolRed | cds-NP_009938.2_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:132436-133686:+ | gene-YCR012W_FaliES1 | rna-NM_001178725.1_FaliES1 | cds-NP_009938.2_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000126.1:46606-47856:+ | gene-YCR012W_JAY291 | rna-NM_001178725.1_JAY291 | cds-NP_009938.2_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:125737-126987:+ | gene-YCR012W_MUCL30387 | rna-NM_001178725.1_MUCL30387 | cds-NP_009938.2_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:124709-125959:+ | gene-YCR012W_MUCL30388 | rna-NM_001178725.1_MUCL30388 | cds-NP_009938.2_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:133187-134437:+ | gene-YCR012W_MUCL39482 | rna-NM_001178725.1_MUCL39482 | cds-NP_009938.2_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:128422-129672:+ | gene-YCR012W_MUCL42920 | rna-NM_001178725.1_MUCL42920 | cds-NP_009938.2_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:137378-138628:+ | gene-YCR012W_NCIM3186 | rna-NM_001178725.1_NCIM3186 | cds-NP_009938.2_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:133918-135168:+ | gene-YCR012W_NCYC1407 | rna-NM_001178725.1_NCYC1407 | cds-NP_009938.2_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:137865-139115:+ | gene-YCR012W_PE2H3 | rna-NM_001178725.1_PE2H3 | cds-NP_009938.2_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:137804-139054:+ | gene-YCR012W_PE2H4 | rna-NM_001178725.1_PE2H4 | cds-NP_009938.2_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:137746-138996:+ | gene-YCR012W_S288C | rna-NM_001178725.1_S288C | cds-NP_009938.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000073.1:12673-13923:- | gene-YCR012W_SA1 | rna-NM_001178725.1_SA1 | cds-NP_009938.2_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:133004-134254:+ | gene-YCR012W_ThermosaccDry | rna-NM_001178725.1_ThermosaccDry | cds-NP_009938.2_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:143934-145184:+ | gene-YCR012W_VR1 | rna-NM_001178725.1_VR1 | cds-NP_009938.2_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:131940-133190:+ | gene-YCR012W_ZTW1 | rna-NM_001178725.1_ZTW1 | cds-NP_009938.2_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:164102-165352:+ | gene-YCR012W_Sparadoxus | rna-NM_001178725.1_Sparadoxus | cds-NP_009938.2_Sparadoxus | 98.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |