Gene name: PGC1
Reference locus (S288C): YPL206C
Gene biotype: protein_coding
Description: Phosphatidylglycerol phospholipase C; regulates phosphatidylglycerol (PG) accumulation via a phospholipase C-type degradation mechanism; PG levels affect mitochondrial function; contains glycerophosphodiester phosphodiesterase motifs; Belongs to the glycerophosphoryl diester phosphodiesterase family
Top 10 interactors (score): GUT2 (0.945); GEP4 (0.928); CRD1 (0.918); ALE1 (0.906); YDL124W (0.89); CLD1 (0.793); NTE1 (0.776); FMP30 (0.709); GTT1 (0.698); GDE1 (0.689); ABP1 (0.682); MOH1 (0.616); ANR2 (0.597); NTH1 (0.594); NTH2 (0.591); ETR1 (0.588); SWR1 (0.585); CAB5 (0.578); PDX3 (0.574); PPH3 (0.573)
Homologues (species, bitscore): GDPD3 (Homo sapiens, 63.5); Gdpd1 (Mus musculus, 62.8); gdpd1 (Danio rerio, 61.2); gdpd1 (Xenopus tropicalis, 56.2); T12B3.3 (Caenorhabditis elegans, 61.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:140505-141470:- | gene-YPL206C_AKU4011 | rna-NM_001184020.1_AKU4011 | cds-NP_015118.1_AKU4011 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:346268-347233:- | gene-YPL206C_BG1 | rna-NM_001184020.1_BG1 | cds-NP_015118.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:165968-166933:- | gene-YPL206C_Bruggeman | rna-NM_001184020.1_Bruggeman | cds-NP_015118.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:162570-163535:- | gene-YPL206C_CAT1 | rna-NM_001184020.1_CAT1 | cds-NP_015118.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:144690-145655:- | gene-YPL206C_CBS1585 | rna-NM_001184020.1_CBS1585 | cds-NP_015118.1_CBS1585 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:159112-160077:- | gene-YPL206C_CBS436 | rna-NM_001184020.1_CBS436 | cds-NP_015118.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:149494-150459:- | gene-YPL206C_CBS6412 | rna-NM_001184020.1_CBS6412 | cds-NP_015118.1_CBS6412 | 98.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:140868-141833:- | gene-YPL206C_CBS6413 | rna-NM_001184020.1_CBS6413 | cds-NP_015118.1_CBS6413 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:162579-163544:- | gene-YPL206C_CENPK1137D | rna-NM_001184020.1_CENPK1137D | cds-NP_015118.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:139623-140588:- | gene-YPL206C_EthanolRed | rna-NM_001184020.1_EthanolRed | cds-NP_015118.1_EthanolRed | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:146829-147794:- | gene-YPL206C_FaliES1 | rna-NM_001184020.1_FaliES1 | cds-NP_015118.1_FaliES1 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000069.1:10534-11499:+ | gene-YPL206C_JAY291 | rna-NM_001184020.1_JAY291 | cds-NP_015118.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:157680-158645:- | gene-YPL206C_MUCL30387 | rna-NM_001184020.1_MUCL30387 | cds-NP_015118.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:155870-156835:- | gene-YPL206C_MUCL30388 | rna-NM_001184020.1_MUCL30388 | cds-NP_015118.1_MUCL30388 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:137820-138785:- | gene-YPL206C_MUCL39482 | rna-NM_001184020.1_MUCL39482 | cds-NP_015118.1_MUCL39482 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:156702-157667:- | gene-YPL206C_MUCL42920 | rna-NM_001184020.1_MUCL42920 | cds-NP_015118.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:162615-163580:- | gene-YPL206C_NCIM3186 | rna-NM_001184020.1_NCIM3186 | cds-NP_015118.1_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:144269-145234:- | gene-YPL206C_NCYC1407 | rna-NM_001184020.1_NCYC1407 | cds-NP_015118.1_NCYC1407 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:151975-152940:- | gene-YPL206C_PE2H3 | rna-NM_001184020.1_PE2H3 | cds-NP_015118.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:151618-152583:- | gene-YPL206C_PE2H4 | rna-NM_001184020.1_PE2H4 | cds-NP_015118.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:162632-163597:- | gene-YPL206C_S288C | rna-NM_001184020.1_S288C | cds-NP_015118.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000095.1:10591-11556:+ | gene-YPL206C_SA1 | rna-NM_001184020.1_SA1 | cds-NP_015118.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:146610-147575:- | gene-YPL206C_ThermosaccDry | rna-NM_001184020.1_ThermosaccDry | cds-NP_015118.1_ThermosaccDry | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:161518-162483:- | gene-YPL206C_VR1 | rna-NM_001184020.1_VR1 | cds-NP_015118.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:146129-147094:- | gene-YPL206C_ZTW1 | rna-NM_001184020.1_ZTW1 | cds-NP_015118.1_ZTW1 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:147695-148660:- | gene-YPL206C_Sparadoxus | rna-NM_001184020.1_Sparadoxus | cds-NP_015118.1_Sparadoxus | 91.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |