Gene name: PGA1
Reference locus (S288C): YNL158W
Gene biotype: protein_coding
Description: GPI mannosyltransferase 2 subunit PGA1; Essential component of GPI-mannosyltransferase II; complex is responsible for second mannose addition to GPI precursors as a partner of Gpi18p; required for maturation of Gas1p and Pho8p; has synthetic genetic interactions with secretory pathway genes
Top 10 interactors (score): GPI18 (0.987); PGA2 (0.943); VAN1 (0.72); GPI14 (0.72); MNN10 (0.72); MNN9 (0.72); MNN11 (0.72); PMT5 (0.72); PMT3 (0.72); PMT4 (0.72); PMT2 (0.72); PBN1 (0.72); PMT1 (0.72); ANP1 (0.72); HOC1 (0.72); GAS1 (0.711); PRC1 (0.56); PMT6 (0.54); PMT7 (0.54); OCH1 (0.54)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:333324-333920:+ | gene-YNL158W_AKU4011 | rna-NM_001182996.1_AKU4011 | cds-NP_014241.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:237352-237948:+ | gene-YNL158W_BG1 | rna-NM_001182996.1_BG1 | cds-NP_014241.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:343390-343986:+ | gene-YNL158W_Bruggeman | rna-NM_001182996.1_Bruggeman | cds-NP_014241.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:386318-386914:+ | gene-YNL158W_CAT1 | rna-NM_001182996.1_CAT1 | cds-NP_014241.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:333975-334571:+ | gene-YNL158W_CBS1585 | rna-NM_001182996.1_CBS1585 | cds-NP_014241.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:402333-402929:+ | gene-YNL158W_CBS436 | rna-NM_001182996.1_CBS436 | cds-NP_014241.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:329381-329977:+ | gene-YNL158W_CBS6412 | rna-NM_001182996.1_CBS6412 | cds-NP_014241.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:330409-331005:+ | gene-YNL158W_CBS6413 | rna-NM_001182996.1_CBS6413 | cds-NP_014241.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:333426-334022:+ | gene-YNL158W_CENPK1137D | rna-NM_001182996.1_CENPK1137D | cds-NP_014241.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:330307-330903:+ | gene-YNL158W_EthanolRed | rna-NM_001182996.1_EthanolRed | cds-NP_014241.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:326220-326816:+ | gene-YNL158W_FaliES1 | rna-NM_001182996.1_FaliES1 | cds-NP_014241.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000439.1:16833-17429:- | gene-YNL158W_JAY291 | rna-NM_001182996.1_JAY291 | cds-NP_014241.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:339211-339807:+ | gene-YNL158W_MUCL30387 | rna-NM_001182996.1_MUCL30387 | cds-NP_014241.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:373764-374360:+ | gene-YNL158W_MUCL30388 | rna-NM_001182996.1_MUCL30388 | cds-NP_014241.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:331215-331811:+ | gene-YNL158W_MUCL39482 | rna-NM_001182996.1_MUCL39482 | cds-NP_014241.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:333618-334214:+ | gene-YNL158W_MUCL42920 | rna-NM_001182996.1_MUCL42920 | cds-NP_014241.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:339581-340177:+ | gene-YNL158W_NCIM3186 | rna-NM_001182996.1_NCIM3186 | cds-NP_014241.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:333309-333905:+ | gene-YNL158W_NCYC1407 | rna-NM_001182996.1_NCYC1407 | cds-NP_014241.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:330303-330899:+ | gene-YNL158W_PE2H3 | rna-NM_001182996.1_PE2H3 | cds-NP_014241.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:329691-330287:+ | gene-YNL158W_PE2H4 | rna-NM_001182996.1_PE2H4 | cds-NP_014241.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:339612-340208:+ | gene-YNL158W_S288C | rna-NM_001182996.1_S288C | cds-NP_014241.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000018.1:73343-73939:- | gene-YNL158W_SA1 | rna-NM_001182996.1_SA1 | cds-NP_014241.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:327077-327673:+ | gene-YNL158W_ThermosaccDry | rna-NM_001182996.1_ThermosaccDry | cds-NP_014241.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:345632-346228:+ | gene-YNL158W_VR1 | rna-NM_001182996.1_VR1 | cds-NP_014241.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:236899-237495:+ | gene-YNL158W_ZTW1 | rna-NM_001182996.1_ZTW1 | cds-NP_014241.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:337729-338325:+ | gene-YNL158W_Sparadoxus | rna-NM_001182996.1_Sparadoxus | cds-NP_014241.1_Sparadoxus | 84.8 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |