Gene name: PFU1
Reference locus (S288C): YDR306C
Gene biotype: protein_coding
Description: F-box protein ydr306c; F-box protein of unknown function; interacts with Sgt1p via a Leucine-Rich Repeat (LRR) domain
Top 10 interactors (score): HRT3 (0.92); SAF1 (0.909); DAS1 (0.866); PEX12 (0.831); YLR352W (0.813); PEX10 (0.783); UCC1 (0.775); RCY1 (0.762); ROY1 (0.746); COS111 (0.745); DAS2 (0.716); ELA1 (0.705); SNT2 (0.654); SKP1 (0.632); SSL1 (0.615); CDC53 (0.582); ASI3 (0.574); AMN1 (0.569); CTF13 (0.569); ASI1 (0.526)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1025749-1027185:- | gene-YDR306C_AKU4011 | rna-NM_001180614.1_AKU4011 | cds-NP_010592.1_AKU4011 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:104391-105827:+ | gene-YDR306C_BG1 | rna-NM_001180614.1_BG1 | cds-NP_010592.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1053015-1054451:- | gene-YDR306C_Bruggeman | rna-NM_001180614.1_Bruggeman | cds-NP_010592.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1040013-1041449:- | gene-YDR306C_CAT1 | rna-NM_001180614.1_CAT1 | cds-NP_010592.1_CAT1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1020194-1021630:- | gene-YDR306C_CBS1585 | rna-NM_001180614.1_CBS1585 | cds-NP_010592.1_CBS1585 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1038563-1039999:- | gene-YDR306C_CBS436 | rna-NM_001180614.1_CBS436 | cds-NP_010592.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1016876-1018312:- | gene-YDR306C_CBS6412 | rna-NM_001180614.1_CBS6412 | cds-NP_010592.1_CBS6412 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1038114-1039550:- | gene-YDR306C_CBS6413 | rna-NM_001180614.1_CBS6413 | cds-NP_010592.1_CBS6413 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1072377-1073816:- | gene-YDR306C_CENPK1137D | rna-NM_001180614.1_CENPK1137D | cds-NP_010592.1_CENPK1137D | 95.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1024104-1025540:- | gene-YDR306C_EthanolRed | rna-NM_001180614.1_EthanolRed | cds-NP_010592.1_EthanolRed | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1032506-1033942:- | gene-YDR306C_FaliES1 | rna-NM_001180614.1_FaliES1 | cds-NP_010592.1_FaliES1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000130.1:50298-51734:- | gene-YDR306C_JAY291 | rna-NM_001180614.1_JAY291 | cds-NP_010592.1_JAY291 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1038501-1039937:- | gene-YDR306C_MUCL30387 | rna-NM_001180614.1_MUCL30387 | cds-NP_010592.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1025598-1027034:- | gene-YDR306C_MUCL30388 | rna-NM_001180614.1_MUCL30388 | cds-NP_010592.1_MUCL30388 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1012000-1013436:- | gene-YDR306C_MUCL39482 | rna-NM_001180614.1_MUCL39482 | cds-NP_010592.1_MUCL39482 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:951965-953401:- | gene-YDR306C_MUCL42920 | rna-NM_001180614.1_MUCL42920 | cds-NP_010592.1_MUCL42920 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1073658-1075094:- | gene-YDR306C_NCIM3186 | rna-NM_001180614.1_NCIM3186 | cds-NP_010592.1_NCIM3186 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1025293-1026729:- | gene-YDR306C_NCYC1407 | rna-NM_001180614.1_NCYC1407 | cds-NP_010592.1_NCYC1407 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1036271-1037707:- | gene-YDR306C_PE2H3 | rna-NM_001180614.1_PE2H3 | cds-NP_010592.1_PE2H3 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1041856-1043292:- | gene-YDR306C_PE2H4 | rna-NM_001180614.1_PE2H4 | cds-NP_010592.1_PE2H4 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1073735-1075171:- | gene-YDR306C_S288C | rna-NM_001180614.1_S288C | cds-NP_010592.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000025.1:50471-51907:- | gene-YDR306C_SA1 | rna-NM_001180614.1_SA1 | cds-NP_010592.1_SA1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1036779-1038215:- | gene-YDR306C_ThermosaccDry | rna-NM_001180614.1_ThermosaccDry | cds-NP_010592.1_ThermosaccDry | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1052690-1054126:- | gene-YDR306C_VR1 | rna-NM_001180614.1_VR1 | cds-NP_010592.1_VR1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:80893-82329:- | gene-YDR306C_ZTW1 | rna-NM_001180614.1_ZTW1 | cds-NP_010592.1_ZTW1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1032330-1033766:- | gene-YDR306C_Sparadoxus | rna-NM_001180614.1_Sparadoxus | cds-NP_010592.1_Sparadoxus | 90.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |