Gene name: PEX34
Reference locus (S288C): YCL056C
Gene biotype: protein_coding
Description: Protein that regulates peroxisome populations; peroxisomal integral membrane protein; interacts with Pex11p, Pex25p, and Pex27p to control both constitutive peroxisome division and peroxisome morphology and abundance during peroxisome proliferation
Top 10 interactors (score): PEX27 (0.902); PEX25 (0.874); PEX11 (0.843); YCR099C (0.765); PEX3 (0.759); INP1 (0.745); PEX19 (0.707); FIS1 (0.704); ANT1 (0.696); PEX9 (0.695); PEX30 (0.694); INP2 (0.694); PEX13 (0.67); GPB2 (0.661); PEX17 (0.651); FZO1 (0.65); ATG36 (0.619); YDL157C (0.614); AGC1 (0.575); MDH3 (0.574)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:28218-28652:- | gene-YCL056C_AKU4011 | rna-NM_001178700.1_AKU4011 | cds-NP_009875.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000090.1:13133-13567:- | gene-YCL056C_BG1 | rna-NM_001178700.1_BG1 | cds-NP_009875.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:15633-16067:- | gene-YCL056C_Bruggeman | rna-NM_001178700.1_Bruggeman | cds-NP_009875.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:28103-28537:- | gene-YCL056C_CAT1 | rna-NM_001178700.1_CAT1 | cds-NP_009875.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:28903-29337:- | gene-YCL056C_CBS1585 | rna-NM_001178700.1_CBS1585 | cds-NP_009875.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:27449-27883:- | gene-YCL056C_CBS436 | rna-NM_001178700.1_CBS436 | cds-NP_009875.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:16662-17096:- | gene-YCL056C_CBS6412 | rna-NM_001178700.1_CBS6412 | cds-NP_009875.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:27675-28109:- | gene-YCL056C_CBS6413 | rna-NM_001178700.1_CBS6413 | cds-NP_009875.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:26519-26953:- | gene-YCL056C_CENPK1137D | rna-NM_001178700.1_CENPK1137D | cds-NP_009875.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:26451-26885:- | gene-YCL056C_EthanolRed | rna-NM_001178700.1_EthanolRed | cds-NP_009875.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:27213-27647:- | gene-YCL056C_FaliES1 | rna-NM_001178700.1_FaliES1 | cds-NP_009875.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000225.1:56687-57121:+ | gene-YCL056C_JAY291 | rna-NM_001178700.1_JAY291 | cds-NP_009875.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:14638-15072:- | gene-YCL056C_MUCL30387 | rna-NM_001178700.1_MUCL30387 | cds-NP_009875.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:14930-15364:- | gene-YCL056C_MUCL30388 | rna-NM_001178700.1_MUCL30388 | cds-NP_009875.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:29287-29721:- | gene-YCL056C_MUCL39482 | rna-NM_001178700.1_MUCL39482 | cds-NP_009875.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:15210-15644:- | gene-YCL056C_MUCL42920 | rna-NM_001178700.1_MUCL42920 | cds-NP_009875.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:26557-26991:- | gene-YCL056C_NCIM3186 | rna-NM_001178700.1_NCIM3186 | cds-NP_009875.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:29615-30049:- | gene-YCL056C_NCYC1407 | rna-NM_001178700.1_NCYC1407 | cds-NP_009875.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:27385-27819:- | gene-YCL056C_PE2H3 | rna-NM_001178700.1_PE2H3 | cds-NP_009875.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:27342-27776:- | gene-YCL056C_PE2H4 | rna-NM_001178700.1_PE2H4 | cds-NP_009875.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:26925-27359:- | gene-YCL056C_S288C | rna-NM_001178700.1_S288C | cds-NP_009875.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000061.1:14077-14511:- | gene-YCL056C_SA1 | rna-NM_001178700.1_SA1 | cds-NP_009875.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:27532-27966:- | gene-YCL056C_ThermosaccDry | rna-NM_001178700.1_ThermosaccDry | cds-NP_009875.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:32820-33254:- | gene-YCL056C_VR1 | rna-NM_001178700.1_VR1 | cds-NP_009875.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:27758-28192:- | gene-YCL056C_ZTW1 | rna-NM_001178700.1_ZTW1 | cds-NP_009875.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:57452-57886:- | gene-YCL056C_Sparadoxus | rna-NM_001178700.1_Sparadoxus | cds-NP_009875.1_Sparadoxus | 88.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |