Gene name: PEX27
Reference locus (S288C): YOR193W
Gene biotype: protein_coding
Description: Peripheral peroxisomal membrane protein; involved in controlling peroxisome size and number, interacts with Pex25p; PEX27 has a paralog, PEX25, that arose from the whole genome duplication
Top 10 interactors (score): PEX25 (0.999); PEX11 (0.966); PEX34 (0.902); PEX3 (0.863); DCI1 (0.857); INP2 (0.75); PEX15 (0.749); PEX32 (0.749); PEX8 (0.748); PEX30 (0.746); PRE7 (0.744); PEX31 (0.712); DNM1 (0.711); PEX18 (0.705); PEX21 (0.699); PEX13 (0.698); PEX19 (0.693); PEX5 (0.675); VPS1 (0.671); PEX22 (0.658)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:701231-702361:+ | gene-YOR193W_AKU4011 | rna-NM_001183612.3_AKU4011 | cds-NP_014836.3_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:103271-104401:+ | gene-YOR193W_BG1 | rna-NM_001183612.3_BG1 | cds-NP_014836.3_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:686062-687192:+ | gene-YOR193W_Bruggeman | rna-NM_001183612.3_Bruggeman | cds-NP_014836.3_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:687345-688475:+ | gene-YOR193W_CAT1 | rna-NM_001183612.3_CAT1 | cds-NP_014836.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:684218-685348:+ | gene-YOR193W_CBS1585 | rna-NM_001183612.3_CBS1585 | cds-NP_014836.3_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:682908-684038:+ | gene-YOR193W_CBS436 | rna-NM_001183612.3_CBS436 | cds-NP_014836.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:681336-682466:+ | gene-YOR193W_CBS6412 | rna-NM_001183612.3_CBS6412 | cds-NP_014836.3_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:689975-691105:+ | gene-YOR193W_CBS6413 | rna-NM_001183612.3_CBS6413 | cds-NP_014836.3_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:710201-711331:+ | gene-YOR193W_CENPK1137D | rna-NM_001183612.3_CENPK1137D | cds-NP_014836.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:677361-678491:+ | gene-YOR193W_EthanolRed | rna-NM_001183612.3_EthanolRed | cds-NP_014836.3_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:682758-683888:+ | gene-YOR193W_FaliES1 | rna-NM_001183612.3_FaliES1 | cds-NP_014836.3_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000381.1:142859-143989:- | gene-YOR193W_JAY291 | rna-NM_001183612.3_JAY291 | cds-NP_014836.3_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:690028-691158:+ | gene-YOR193W_MUCL30387 | rna-NM_001183612.3_MUCL30387 | cds-NP_014836.3_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:697446-698576:+ | gene-YOR193W_MUCL30388 | rna-NM_001183612.3_MUCL30388 | cds-NP_014836.3_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:691547-692677:+ | gene-YOR193W_MUCL39482 | rna-NM_001183612.3_MUCL39482 | cds-NP_014836.3_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:701131-702261:+ | gene-YOR193W_MUCL42920 | rna-NM_001183612.3_MUCL42920 | cds-NP_014836.3_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:710335-711465:+ | gene-YOR193W_NCIM3186 | rna-NM_001183612.3_NCIM3186 | cds-NP_014836.3_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:691645-692775:+ | gene-YOR193W_NCYC1407 | rna-NM_001183612.3_NCYC1407 | cds-NP_014836.3_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:691044-692174:+ | gene-YOR193W_PE2H3 | rna-NM_001183612.3_PE2H3 | cds-NP_014836.3_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:701421-702551:+ | gene-YOR193W_PE2H4 | rna-NM_001183612.3_PE2H4 | cds-NP_014836.3_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:710446-711576:+ | gene-YOR193W_S288C | rna-NM_001183612.3_S288C | cds-NP_014836.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:120451-121581:+ | gene-YOR193W_SA1 | rna-NM_001183612.3_SA1 | cds-NP_014836.3_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:681943-683073:+ | gene-YOR193W_ThermosaccDry | rna-NM_001183612.3_ThermosaccDry | cds-NP_014836.3_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:745484-746614:+ | gene-YOR193W_VR1 | rna-NM_001183612.3_VR1 | cds-NP_014836.3_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:414859-415989:+ | gene-YOR193W_ZTW1 | rna-NM_001183612.3_ZTW1 | cds-NP_014836.3_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:687832-688959:+ | gene-YOR193W_Sparadoxus | rna-NM_001183612.3_Sparadoxus | cds-NP_014836.3_Sparadoxus | 81.8 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |