Gene name: PEX21
Reference locus (S288C): YGR239C
Gene biotype: protein_coding
Description: Peroxin required for peroxisomal matrix protein targeting; acts on proteins containing the PTS2 targeting sequence; interacts with Pex7p; constitutively expressed; partially redundant with Pex18p; required for import of the Gpd1p-Pnc1p heterodimer in which only Gpd1p has a peroxisomal targeting signal; relative distribution to cytoplasmic foci increases upon DNA replication stress; Belongs to the peroxin-21 family
Top 10 interactors (score): PEX7 (0.998); PEX18 (0.983); SES1 (0.966); PEX13 (0.956); PRE7 (0.919); PEX4 (0.892); PEX17 (0.892); PEX5 (0.892); POT1 (0.876); PEX8 (0.849); DIA4 (0.837); PEX14 (0.832); PEX12 (0.818); PEX15 (0.813); PEX10 (0.813); PEX6 (0.811); DCI1 (0.779); PEX9 (0.779); PEX22 (0.775); PEX2 (0.75)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:934592-935458:- | gene-YGR239C_AKU4011 | rna-NM_001181368.3_AKU4011 | cds-NP_011755.3_AKU4011 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:214697-215563:- | gene-YGR239C_BG1 | rna-NM_001181368.3_BG1 | cds-NP_011755.3_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:942185-943051:- | gene-YGR239C_Bruggeman | rna-NM_001181368.3_Bruggeman | cds-NP_011755.3_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:941728-942594:- | gene-YGR239C_CAT1 | rna-NM_001181368.3_CAT1 | cds-NP_011755.3_CAT1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:937454-938320:- | gene-YGR239C_CBS1585 | rna-NM_001181368.3_CBS1585 | cds-NP_011755.3_CBS1585 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:941109-941975:- | gene-YGR239C_CBS436 | rna-NM_001181368.3_CBS436 | cds-NP_011755.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:928332-929198:- | gene-YGR239C_CBS6412 | rna-NM_001181368.3_CBS6412 | cds-NP_011755.3_CBS6412 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:934383-935249:- | gene-YGR239C_CBS6413 | rna-NM_001181368.3_CBS6413 | cds-NP_011755.3_CBS6413 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:968868-969734:- | gene-YGR239C_CENPK1137D | rna-NM_001181368.3_CENPK1137D | cds-NP_011755.3_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:922430-923296:- | gene-YGR239C_EthanolRed | rna-NM_001181368.3_EthanolRed | cds-NP_011755.3_EthanolRed | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:927236-928102:- | gene-YGR239C_FaliES1 | rna-NM_001181368.3_FaliES1 | cds-NP_011755.3_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000076.1:102187-103053:+ | gene-YGR239C_JAY291 | rna-NM_001181368.3_JAY291 | cds-NP_011755.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:940101-940967:- | gene-YGR239C_MUCL30387 | rna-NM_001181368.3_MUCL30387 | cds-NP_011755.3_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:939365-940231:- | gene-YGR239C_MUCL30388 | rna-NM_001181368.3_MUCL30388 | cds-NP_011755.3_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:932580-933446:- | gene-YGR239C_MUCL39482 | rna-NM_001181368.3_MUCL39482 | cds-NP_011755.3_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:951082-951948:- | gene-YGR239C_MUCL42920 | rna-NM_001181368.3_MUCL42920 | cds-NP_011755.3_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:969187-970053:- | gene-YGR239C_NCIM3186 | rna-NM_001181368.3_NCIM3186 | cds-NP_011755.3_NCIM3186 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:928194-929060:- | gene-YGR239C_NCYC1407 | rna-NM_001181368.3_NCYC1407 | cds-NP_011755.3_NCYC1407 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:953379-954245:- | gene-YGR239C_PE2H3 | rna-NM_001181368.3_PE2H3 | cds-NP_011755.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:958218-959084:- | gene-YGR239C_PE2H4 | rna-NM_001181368.3_PE2H4 | cds-NP_011755.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:969187-970053:- | gene-YGR239C_S288C | rna-NM_001181368.3_S288C | cds-NP_011755.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000045.1:31442-32308:+ | gene-YGR239C_SA1 | rna-NM_001181368.3_SA1 | cds-NP_011755.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:947763-948629:- | gene-YGR239C_ThermosaccDry | rna-NM_001181368.3_ThermosaccDry | cds-NP_011755.3_ThermosaccDry | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:1053025-1053891:- | gene-YGR239C_VR1 | rna-NM_001181368.3_VR1 | cds-NP_011755.3_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:249174-250040:- | gene-YGR239C_ZTW1 | rna-NM_001181368.3_ZTW1 | cds-NP_011755.3_ZTW1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:939999-940862:- | gene-YGR239C_Sparadoxus | rna-NM_001181368.3_Sparadoxus | cds-NP_011755.3_Sparadoxus | 85.3 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |