Gene name: PEX18
Reference locus (S288C): YHR160C
Gene biotype: protein_coding
Description: Peroxin; required for targeting of peroxisomal matrix proteins containing PTS2; interacts with Pex7p; partially redundant with Pex21p; primarily responsible for peroxisomal import during growth on oleate, and expression is induced during oleate growth
Top 10 interactors (score): PEX7 (0.998); PEX21 (0.983); PEX13 (0.968); PEX14 (0.966); PEX5 (0.951); POT1 (0.95); PEX17 (0.941); PRE7 (0.916); PEX6 (0.866); PEX12 (0.866); PEX4 (0.852); PEX8 (0.844); PEX15 (0.843); DCI1 (0.843); PEX10 (0.831); PEX2 (0.82); PEX1 (0.82); PEX22 (0.814); POX1 (0.755); PEX9 (0.747)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:406321-407172:- | gene-YHR160C_AKU4011 | rna-NM_001179291.1_AKU4011 | cds-NP_012030.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:110558-111409:+ | gene-YHR160C_BG1 | rna-NM_001179291.1_BG1 | cds-NP_012030.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:413561-414412:- | gene-YHR160C_Bruggeman | rna-NM_001179291.1_Bruggeman | cds-NP_012030.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:408975-409826:- | gene-YHR160C_CAT1 | rna-NM_001179291.1_CAT1 | cds-NP_012030.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:405778-406629:- | gene-YHR160C_CBS1585 | rna-NM_001179291.1_CBS1585 | cds-NP_012030.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:403231-404082:- | gene-YHR160C_CBS436 | rna-NM_001179291.1_CBS436 | cds-NP_012030.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:406231-407082:- | gene-YHR160C_CBS6412 | rna-NM_001179291.1_CBS6412 | cds-NP_012030.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:406658-407509:- | gene-YHR160C_CBS6413 | rna-NM_001179291.1_CBS6413 | cds-NP_012030.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:412393-413244:- | gene-YHR160C_CENPK1137D | rna-NM_001179291.1_CENPK1137D | cds-NP_012030.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:464872-465723:- | gene-YHR160C_EthanolRed | rna-NM_001179291.1_EthanolRed | cds-NP_012030.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:407315-408166:- | gene-YHR160C_FaliES1 | rna-NM_001179291.1_FaliES1 | cds-NP_012030.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000017.1:31675-32526:+ | gene-YHR160C_JAY291 | rna-NM_001179291.1_JAY291 | cds-NP_012030.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:414641-415492:- | gene-YHR160C_MUCL30387 | rna-NM_001179291.1_MUCL30387 | cds-NP_012030.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:414083-414934:- | gene-YHR160C_MUCL30388 | rna-NM_001179291.1_MUCL30388 | cds-NP_012030.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:405689-406540:- | gene-YHR160C_MUCL39482 | rna-NM_001179291.1_MUCL39482 | cds-NP_012030.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:412298-413149:- | gene-YHR160C_MUCL42920 | rna-NM_001179291.1_MUCL42920 | cds-NP_012030.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:419103-419954:- | gene-YHR160C_NCIM3186 | rna-NM_001179291.1_NCIM3186 | cds-NP_012030.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:408147-408998:- | gene-YHR160C_NCYC1407 | rna-NM_001179291.1_NCYC1407 | cds-NP_012030.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:407291-408142:- | gene-YHR160C_PE2H3 | rna-NM_001179291.1_PE2H3 | cds-NP_012030.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:414718-415569:- | gene-YHR160C_PE2H4 | rna-NM_001179291.1_PE2H4 | cds-NP_012030.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:419221-420072:- | gene-YHR160C_S288C | rna-NM_001179291.1_S288C | cds-NP_012030.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000070.1:31729-32580:+ | gene-YHR160C_SA1 | rna-NM_001179291.1_SA1 | cds-NP_012030.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:408398-409249:- | gene-YHR160C_ThermosaccDry | rna-NM_001179291.1_ThermosaccDry | cds-NP_012030.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:416213-417064:- | gene-YHR160C_VR1 | rna-NM_001179291.1_VR1 | cds-NP_012030.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:398638-399489:- | gene-YHR160C_ZTW1 | rna-NM_001179291.1_ZTW1 | cds-NP_012030.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:404785-405636:- | gene-YHR160C_Sparadoxus | rna-NM_001179291.1_Sparadoxus | cds-NP_012030.1_Sparadoxus | 81.3 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |