Gene name: PEX13
Reference locus (S288C): YLR191W
Gene biotype: protein_coding
Description: Peroxisomal membrane protein PAS20; Peroxisomal importomer complex component; integral peroxisomal membrane protein required for docking and translocation of peroxisomal matrix proteins; interacts with the PTS1 signal recognition factor Pex5p and the PTS2 signal recognition factor Pex7p; forms a complex with Pex14p and Pex17p; human homolog PEX13 complements yeast null mutant; Belongs to the peroxin-13 family
Top 10 interactors (score): PEX7 (0.999); PEX12 (0.999); PEX6 (0.999); PEX3 (0.999); PEX2 (0.999); PEX11 (0.999); PEX5 (0.999); PEX14 (0.999); PEX19 (0.999); PEX10 (0.999); PEX17 (0.999); PEX8 (0.997); PEX1 (0.997); PXA1 (0.995); PEX15 (0.975); PXA2 (0.971); PEX18 (0.968); PRE7 (0.962); PEX4 (0.961); PEX21 (0.956)
Homologues (species, bitscore): PEX13 (Homo sapiens, 99.8); Pex13 (Mus musculus, 100.5); pex13 (Danio rerio, 102.1); pex13 (Xenopus tropicalis, 106.3); Pex13 (Drosophila melanogaster, 108.2); prx-13 (Caenorhabditis elegans, 104.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:491391-492551:+ | gene-YLR191W_AKU4011 | rna-NM_001182078.1_AKU4011 | cds-NP_013292.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000177.1:48573-49733:+ | gene-YLR191W_BG1 | rna-NM_001182078.1_BG1 | cds-NP_013292.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:531642-532802:+ | gene-YLR191W_Bruggeman | rna-NM_001182078.1_Bruggeman | cds-NP_013292.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:531236-532396:+ | gene-YLR191W_CAT1 | rna-NM_001182078.1_CAT1 | cds-NP_013292.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:526888-528048:+ | gene-YLR191W_CBS1585 | rna-NM_001182078.1_CBS1585 | cds-NP_013292.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:517028-518188:+ | gene-YLR191W_CBS436 | rna-NM_001182078.1_CBS436 | cds-NP_013292.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:495445-496605:+ | gene-YLR191W_CBS6412 | rna-NM_001182078.1_CBS6412 | cds-NP_013292.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:527180-528340:+ | gene-YLR191W_CBS6413 | rna-NM_001182078.1_CBS6413 | cds-NP_013292.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:521920-523080:+ | gene-YLR191W_CENPK1137D | rna-NM_001182078.1_CENPK1137D | cds-NP_013292.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:490919-492079:+ | gene-YLR191W_EthanolRed | rna-NM_001182078.1_EthanolRed | cds-NP_013292.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:519846-521006:+ | gene-YLR191W_FaliES1 | rna-NM_001182078.1_FaliES1 | cds-NP_013292.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000004.1:46745-47905:+ | gene-YLR191W_JAY291 | rna-NM_001182078.1_JAY291 | cds-NP_013292.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:531661-532821:+ | gene-YLR191W_MUCL30387 | rna-NM_001182078.1_MUCL30387 | cds-NP_013292.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:536594-537754:+ | gene-YLR191W_MUCL30388 | rna-NM_001182078.1_MUCL30388 | cds-NP_013292.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:527869-529029:+ | gene-YLR191W_MUCL39482 | rna-NM_001182078.1_MUCL39482 | cds-NP_013292.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:528365-529525:+ | gene-YLR191W_MUCL42920 | rna-NM_001182078.1_MUCL42920 | cds-NP_013292.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:537246-538406:+ | gene-YLR191W_NCIM3186 | rna-NM_001182078.1_NCIM3186 | cds-NP_013292.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:520297-521457:+ | gene-YLR191W_NCYC1407 | rna-NM_001182078.1_NCYC1407 | cds-NP_013292.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:524534-525694:+ | gene-YLR191W_PE2H3 | rna-NM_001182078.1_PE2H3 | cds-NP_013292.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:524278-525438:+ | gene-YLR191W_PE2H4 | rna-NM_001182078.1_PE2H4 | cds-NP_013292.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:537272-538432:+ | gene-YLR191W_S288C | rna-NM_001182078.1_S288C | cds-NP_013292.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000042.1:46803-47963:+ | gene-YLR191W_SA1 | rna-NM_001182078.1_SA1 | cds-NP_013292.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:522349-523509:+ | gene-YLR191W_ThermosaccDry | rna-NM_001182078.1_ThermosaccDry | cds-NP_013292.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:533647-534807:+ | gene-YLR191W_VR1 | rna-NM_001182078.1_VR1 | cds-NP_013292.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000024.1:46638-47798:+ | gene-YLR191W_ZTW1 | rna-NM_001182078.1_ZTW1 | cds-NP_013292.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:508424-509578:+ | gene-YLR191W_Sparadoxus | rna-NM_001182078.1_Sparadoxus | cds-NP_013292.1_Sparadoxus | 89.1 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |