Gene name: PEX11
Reference locus (S288C): YOL147C
Gene biotype: protein_coding
Description: Peroxisomal protein required for medium-chain fatty acid oxidation; also required for peroxisome proliferation, possibly by inducing membrane curvature; localization regulated by phosphorylation; transcription regulated by Adr1p and Pip2p-Oaf1p; Belongs to the peroxin-11 family
Top 10 interactors (score): PEX13 (0.999); PEX12 (0.999); PEX3 (0.999); PEX5 (0.999); PEX10 (0.999); PEX14 (0.999); PEX19 (0.999); FIS1 (0.998); PXA1 (0.997); PEX2 (0.995); MDM34 (0.994); PEX6 (0.989); PXA2 (0.987); FAA2 (0.987); PEX25 (0.982); PEX7 (0.982); PEX1 (0.98); PEX8 (0.977); PEX17 (0.974); PEX27 (0.966)
Homologues (species, bitscore): pex11a (Danio rerio, 51.2); Pex11 (Drosophila melanogaster, 52.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:36587-37297:- | gene-YOL147C_AKU4011 | rna-NM_001183401.1_AKU4011 | cds-NP_014494.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000172.1:2217-2927:- | gene-YOL147C_BG1 | rna-NM_001183401.1_BG1 | cds-NP_014494.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:37884-38594:- | gene-YOL147C_Bruggeman | rna-NM_001183401.1_Bruggeman | cds-NP_014494.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:36581-37291:- | gene-YOL147C_CAT1 | rna-NM_001183401.1_CAT1 | cds-NP_014494.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:31054-31764:- | gene-YOL147C_CBS1585 | rna-NM_001183401.1_CBS1585 | cds-NP_014494.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:36907-37617:- | gene-YOL147C_CBS436 | rna-NM_001183401.1_CBS436 | cds-NP_014494.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:30956-31666:- | gene-YOL147C_CBS6412 | rna-NM_001183401.1_CBS6412 | cds-NP_014494.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:37402-38112:- | gene-YOL147C_CBS6413 | rna-NM_001183401.1_CBS6413 | cds-NP_014494.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:47831-48541:- | gene-YOL147C_CENPK1137D | rna-NM_001183401.1_CENPK1137D | cds-NP_014494.1_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:34862-35572:- | gene-YOL147C_EthanolRed | rna-NM_001183401.1_EthanolRed | cds-NP_014494.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:36885-37595:- | gene-YOL147C_FaliES1 | rna-NM_001183401.1_FaliES1 | cds-NP_014494.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000329.1:44973-45683:+ | gene-YOL147C_JAY291 | rna-NM_001183401.1_JAY291 | cds-NP_014494.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:42505-43215:- | gene-YOL147C_MUCL30387 | rna-NM_001183401.1_MUCL30387 | cds-NP_014494.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:45515-46225:- | gene-YOL147C_MUCL30388 | rna-NM_001183401.1_MUCL30388 | cds-NP_014494.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:38984-39694:- | gene-YOL147C_MUCL39482 | rna-NM_001183401.1_MUCL39482 | cds-NP_014494.1_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:54910-55620:- | gene-YOL147C_MUCL42920 | rna-NM_001183401.1_MUCL42920 | cds-NP_014494.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:47822-48532:- | gene-YOL147C_NCIM3186 | rna-NM_001183401.1_NCIM3186 | cds-NP_014494.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:45065-45775:- | gene-YOL147C_NCYC1407 | rna-NM_001183401.1_NCYC1407 | cds-NP_014494.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:23456-24166:- | gene-YOL147C_PE2H3 | rna-NM_001183401.1_PE2H3 | cds-NP_014494.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:40404-41114:- | gene-YOL147C_PE2H4 | rna-NM_001183401.1_PE2H4 | cds-NP_014494.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:47933-48643:- | gene-YOL147C_S288C | rna-NM_001183401.1_S288C | cds-NP_014494.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:21315-22025:- | gene-YOL147C_SA1 | rna-NM_001183401.1_SA1 | cds-NP_014494.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:36028-36738:- | gene-YOL147C_ThermosaccDry | rna-NM_001183401.1_ThermosaccDry | cds-NP_014494.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:36678-37388:- | gene-YOL147C_VR1 | rna-NM_001183401.1_VR1 | cds-NP_014494.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000031.1:35784-36494:- | gene-YOL147C_ZTW1 | rna-NM_001183401.1_ZTW1 | cds-NP_014494.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:38305-39015:- | gene-YOL147C_Sparadoxus | rna-NM_001183401.1_Sparadoxus | cds-NP_014494.1_Sparadoxus | 89.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |