PET20 (YPL159C)


Gene profile

Gene name: PET20
Reference locus (S288C): YPL159C
Gene biotype: protein_coding

Description: Protein pet20, mitochondrial; Mitochondrial protein; required for respiratory growth under some conditions and for stability of the mitochondrial genome

Top 10 interactors (score): MRX6 (0.952); ERG29 (0.827); MAM33 (0.728); MRX14 (0.719); MMT2 (0.71); MTQ1 (0.702); MMT1 (0.698); PIM1 (0.659); FRK1 (0.655); OAR1 (0.621); MRPS5 (0.616); MRPL4 (0.614); JID1 (0.61); NAN1 (0.573); TFC4 (0.571); MSC1 (0.515); PHO91 (0.499); RRP7 (0.497); RPP2B (0.489); UTP22 (0.483)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005310.1:228572-229333:- gene-YPL159C_AKU4011 rna-NM_001183973.1_AKU4011 cds-NP_015166.1_AKU4011 98.9 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:434239-435000:- gene-YPL159C_BG1 rna-NM_001183973.1_BG1 cds-NP_015166.1_BG1 99.8 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:254563-255324:- gene-YPL159C_Bruggeman rna-NM_001183973.1_Bruggeman cds-NP_015166.1_Bruggeman 99.2 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:251228-251989:- gene-YPL159C_CAT1 rna-NM_001183973.1_CAT1 cds-NP_015166.1_CAT1 99.8 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:232635-233396:- gene-YPL159C_CBS1585 rna-NM_001183973.1_CBS1585 cds-NP_015166.1_CBS1585 99.0 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005358.1:247291-248052:- gene-YPL159C_CBS436 rna-NM_001183973.1_CBS436 cds-NP_015166.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005342.1:237313-238074:- gene-YPL159C_CBS6412 rna-NM_001183973.1_CBS6412 cds-NP_015166.1_CBS6412 99.0 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:229275-230036:- gene-YPL159C_CBS6413 rna-NM_001183973.1_CBS6413 cds-NP_015166.1_CBS6413 99.0 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:250791-251552:- gene-YPL159C_CENPK1137D rna-NM_001183973.1_CENPK1137D cds-NP_015166.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:227302-228063:- gene-YPL159C_EthanolRed rna-NM_001183973.1_EthanolRed cds-NP_015166.1_EthanolRed 99.0 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005550.1:234894-235655:- gene-YPL159C_FaliES1 rna-NM_001183973.1_FaliES1 cds-NP_015166.1_FaliES1 99.0 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000007.1:130244-131005:+ gene-YPL159C_JAY291 rna-NM_001183973.1_JAY291 cds-NP_015166.1_JAY291 99.8 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:245805-246566:- gene-YPL159C_MUCL30387 rna-NM_001183973.1_MUCL30387 cds-NP_015166.1_MUCL30387 99.0 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:243822-244583:- gene-YPL159C_MUCL30388 rna-NM_001183973.1_MUCL30388 cds-NP_015166.1_MUCL30388 99.0 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:225964-226725:- gene-YPL159C_MUCL39482 rna-NM_001183973.1_MUCL39482 cds-NP_015166.1_MUCL39482 99.0 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:282692-283453:- gene-YPL159C_MUCL42920 rna-NM_001183973.1_MUCL42920 cds-NP_015166.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:250890-251651:- gene-YPL159C_NCIM3186 rna-NM_001183973.1_NCIM3186 cds-NP_015166.1_NCIM3186 99.2 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:232427-233188:- gene-YPL159C_NCYC1407 rna-NM_001183973.1_NCYC1407 cds-NP_015166.1_NCYC1407 98.9 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:239853-240614:- gene-YPL159C_PE2H3 rna-NM_001183973.1_PE2H3 cds-NP_015166.1_PE2H3 99.8 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:239496-240257:- gene-YPL159C_PE2H4 rna-NM_001183973.1_PE2H4 cds-NP_015166.1_PE2H4 99.8 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:250907-251668:- gene-YPL159C_S288C rna-NM_001183973.1_S288C cds-NP_015166.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000012.1:122018-122779:+ gene-YPL159C_SA1 rna-NM_001183973.1_SA1 cds-NP_015166.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:234692-235453:- gene-YPL159C_ThermosaccDry rna-NM_001183973.1_ThermosaccDry cds-NP_015166.1_ThermosaccDry 99.0 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:249624-250385:- gene-YPL159C_VR1 rna-NM_001183973.1_VR1 cds-NP_015166.1_VR1 99.8 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000033.1:234021-234782:- gene-YPL159C_ZTW1 rna-NM_001183973.1_ZTW1 cds-NP_015166.1_ZTW1 99.0 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:235615-236376:- gene-YPL159C_Sparadoxus rna-NM_001183973.1_Sparadoxus cds-NP_015166.1_Sparadoxus 90.0 100.0 Verified 1 1 1 False True False False False

Additional files