Gene name: PET112
Reference locus (S288C): YBL080C
Gene biotype: protein_coding
Description: Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex; involved in the formation of Q-tRNAQ; mutation is functionally complemented by the bacterial GatB ortholog; Belongs to the GatB/GatE family. GatB subfamily
Top 10 interactors (score): HER2 (0.999); GTF1 (0.997); SLM5 (0.979); NCA2 (0.975); GLN4 (0.975); DED81 (0.966); YGL159W (0.947); DUR1,2 (0.943); GUS1 (0.925); MSE1 (0.914); AMD2 (0.909); ILS1 (0.859); DPS1 (0.855); MSD1 (0.849); MSY1 (0.842); VAS1 (0.817); PET111 (0.813); PET309 (0.793); ATP1 (0.759); RSM28 (0.747)
Homologues (species, bitscore): GATB (Homo sapiens, 206.5); Pet112 (Mus musculus, 210.7); pet112 (Danio rerio, 221.1); GATB (Xenopus tropicalis, 214.5); CG5463 (Drosophila melanogaster, 239.6); C39B5.6 (Caenorhabditis elegans, 198.4); GATB (Arabidopsis thaliana, 219.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:66622-68247:- | gene-YBL080C_AKU4011 | rna-NM_001178320.2_AKU4011 | cds-NP_009473.2_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:57515-59140:- | gene-YBL080C_BG1 | rna-NM_001178320.2_BG1 | cds-NP_009473.2_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:67232-68857:- | gene-YBL080C_Bruggeman | rna-NM_001178320.2_Bruggeman | cds-NP_009473.2_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:69188-70813:- | gene-YBL080C_CAT1 | rna-NM_001178320.2_CAT1 | cds-NP_009473.2_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:58721-60346:- | gene-YBL080C_CBS1585 | rna-NM_001178320.2_CBS1585 | cds-NP_009473.2_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:67481-69106:- | gene-YBL080C_CBS436 | rna-NM_001178320.2_CBS436 | cds-NP_009473.2_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:58114-59739:- | gene-YBL080C_CBS6412 | rna-NM_001178320.2_CBS6412 | cds-NP_009473.2_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:64769-66394:- | gene-YBL080C_CBS6413 | rna-NM_001178320.2_CBS6413 | cds-NP_009473.2_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:66724-68349:- | gene-YBL080C_CENPK1137D | rna-NM_001178320.2_CENPK1137D | cds-NP_009473.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:80876-82501:- | gene-YBL080C_EthanolRed | rna-NM_001178320.2_EthanolRed | cds-NP_009473.2_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:81005-82630:- | gene-YBL080C_FaliES1 | rna-NM_001178320.2_FaliES1 | cds-NP_009473.2_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000019.1:12888-14513:- | gene-YBL080C_JAY291 | rna-NM_001178320.2_JAY291 | cds-NP_009473.2_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:66364-67989:- | gene-YBL080C_MUCL30387 | rna-NM_001178320.2_MUCL30387 | cds-NP_009473.2_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:67887-69512:- | gene-YBL080C_MUCL30388 | rna-NM_001178320.2_MUCL30388 | cds-NP_009473.2_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:58902-60527:- | gene-YBL080C_MUCL39482 | rna-NM_001178320.2_MUCL39482 | cds-NP_009473.2_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:65735-67360:- | gene-YBL080C_MUCL42920 | rna-NM_001178320.2_MUCL42920 | cds-NP_009473.2_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:72867-74492:- | gene-YBL080C_NCIM3186 | rna-NM_001178320.2_NCIM3186 | cds-NP_009473.2_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:60513-62138:- | gene-YBL080C_NCYC1407 | rna-NM_001178320.2_NCYC1407 | cds-NP_009473.2_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:66803-68428:- | gene-YBL080C_PE2H3 | rna-NM_001178320.2_PE2H3 | cds-NP_009473.2_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:64447-66072:- | gene-YBL080C_PE2H4 | rna-NM_001178320.2_PE2H4 | cds-NP_009473.2_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:73070-74695:- | gene-YBL080C_S288C | rna-NM_001178320.2_S288C | cds-NP_009473.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:57181-58806:- | gene-YBL080C_SA1 | rna-NM_001178320.2_SA1 | cds-NP_009473.2_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:80966-82591:- | gene-YBL080C_ThermosaccDry | rna-NM_001178320.2_ThermosaccDry | cds-NP_009473.2_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:63137-64762:- | gene-YBL080C_VR1 | rna-NM_001178320.2_VR1 | cds-NP_009473.2_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:58182-59807:- | gene-YBL080C_ZTW1 | rna-NM_001178320.2_ZTW1 | cds-NP_009473.2_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:92868-94493:- | gene-YBL080C_Sparadoxus | rna-NM_001178320.2_Sparadoxus | cds-NP_009473.2_Sparadoxus | 89.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |