Gene name: PEP7
Reference locus (S288C): YDR323C
Gene biotype: protein_coding
Description: Adaptor protein involved in vesicle-mediated vacuolar protein sorting; multivalent adaptor protein; facilitates vesicle-mediated vacuolar protein sorting by ensuring high-fidelity vesicle docking and fusion, which are essential for targeting of vesicles to the endosome; required for vacuole inheritance
Top 10 interactors (score): VPS45 (0.999); VPS21 (0.997); FAB1 (0.992); YPT52 (0.987); PEP12 (0.981); YPT53 (0.954); VPS27 (0.954); YPT7 (0.953); PEP3 (0.95); VPS9 (0.942); PEP5 (0.938); VPS34 (0.938); VPS8 (0.918); VPS3 (0.915); VPS33 (0.912); SEC1 (0.908); VPS16 (0.901); YPT10 (0.888); VAM6 (0.859); VPS41 (0.859)
Homologues (species, bitscore): ZFYVE20 (Homo sapiens, 68.9); Zfyve20 (Mus musculus, 71.6); LOC569240 (Danio rerio, 65.1); zfyve20 (Xenopus tropicalis, 73.9); Rbsn-5 (Drosophila melanogaster, 71.2); rabs-5 (Caenorhabditis elegans, 62.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1058505-1060052:- | gene-YDR323C_AKU4011 | rna-NM_001180631.3_AKU4011 | cds-NP_010610.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:71495-73042:+ | gene-YDR323C_BG1 | rna-NM_001180631.3_BG1 | cds-NP_010610.3_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1086047-1087594:- | gene-YDR323C_Bruggeman | rna-NM_001180631.3_Bruggeman | cds-NP_010610.3_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1072806-1074353:- | gene-YDR323C_CAT1 | rna-NM_001180631.3_CAT1 | cds-NP_010610.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1052949-1054496:- | gene-YDR323C_CBS1585 | rna-NM_001180631.3_CBS1585 | cds-NP_010610.3_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1071345-1072892:- | gene-YDR323C_CBS436 | rna-NM_001180631.3_CBS436 | cds-NP_010610.3_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1049637-1051184:- | gene-YDR323C_CBS6412 | rna-NM_001180631.3_CBS6412 | cds-NP_010610.3_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1070868-1072415:- | gene-YDR323C_CBS6413 | rna-NM_001180631.3_CBS6413 | cds-NP_010610.3_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1111118-1112665:- | gene-YDR323C_CENPK1137D | rna-NM_001180631.3_CENPK1137D | cds-NP_010610.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:234047-235594:- | gene-YDR323C_EthanolRed | rna-NM_001180631.3_EthanolRed | cds-NP_010610.3_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1065262-1066809:- | gene-YDR323C_FaliES1 | rna-NM_001180631.3_FaliES1 | cds-NP_010610.3_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000386.1:17786-19333:- | gene-YDR323C_JAY291 | rna-NM_001180631.3_JAY291 | cds-NP_010610.3_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1071308-1072855:- | gene-YDR323C_MUCL30387 | rna-NM_001180631.3_MUCL30387 | cds-NP_010610.3_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1060243-1061790:- | gene-YDR323C_MUCL30388 | rna-NM_001180631.3_MUCL30388 | cds-NP_010610.3_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1044756-1046303:- | gene-YDR323C_MUCL39482 | rna-NM_001180631.3_MUCL39482 | cds-NP_010610.3_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:991839-993386:- | gene-YDR323C_MUCL42920 | rna-NM_001180631.3_MUCL42920 | cds-NP_010610.3_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1112403-1113950:- | gene-YDR323C_NCIM3186 | rna-NM_001180631.3_NCIM3186 | cds-NP_010610.3_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1058047-1059594:- | gene-YDR323C_NCYC1407 | rna-NM_001180631.3_NCYC1407 | cds-NP_010610.3_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1069064-1070611:- | gene-YDR323C_PE2H3 | rna-NM_001180631.3_PE2H3 | cds-NP_010610.3_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1074649-1076196:- | gene-YDR323C_PE2H4 | rna-NM_001180631.3_PE2H4 | cds-NP_010610.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1112480-1114027:- | gene-YDR323C_S288C | rna-NM_001180631.3_S288C | cds-NP_010610.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000025.1:83293-84840:- | gene-YDR323C_SA1 | rna-NM_001180631.3_SA1 | cds-NP_010610.3_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1069535-1071082:- | gene-YDR323C_ThermosaccDry | rna-NM_001180631.3_ThermosaccDry | cds-NP_010610.3_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1085462-1087009:- | gene-YDR323C_VR1 | rna-NM_001180631.3_VR1 | cds-NP_010610.3_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:113644-115191:- | gene-YDR323C_ZTW1 | rna-NM_001180631.3_ZTW1 | cds-NP_010610.3_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1064970-1066517:- | gene-YDR323C_Sparadoxus | rna-NM_001180631.3_Sparadoxus | cds-NP_010610.3_Sparadoxus | 89.4 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |