Gene name: PDS1
Reference locus (S288C): YDR113C
Gene biotype: protein_coding
Description: Securin; inhibits anaphase by binding separin Esp1p; blocks cyclin destruction and mitotic exit, essential for meiotic progression and mitotic cell cycle arrest; localization is cell-cycle dependent and regulated by Cdc28p phosphorylation; Belongs to the securin family
Top 10 interactors (score): CDC20 (0.999); ESP1 (0.999); CHK1 (0.984); CDH1 (0.979); CDC28 (0.963); CDC23 (0.959); CLB2 (0.955); CIN8 (0.95); MCD1 (0.947); SLK19 (0.944); CDC16 (0.933); CLB5 (0.929); CDC14 (0.923); CDC27 (0.92); RAD53 (0.911); ASE1 (0.908); KIP1 (0.908); MAD2 (0.9); CDC15 (0.87); DUN1 (0.861)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:651426-652547:- | gene-YDR113C_AKU4011 | rna-NM_001180421.3_AKU4011 | cds-NP_010398.3_AKU4011 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:472333-473457:+ | gene-YDR113C_BG1 | rna-NM_001180421.3_BG1 | cds-NP_010398.3_BG1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:683489-684610:- | gene-YDR113C_Bruggeman | rna-NM_001180421.3_Bruggeman | cds-NP_010398.3_Bruggeman | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:670229-671350:- | gene-YDR113C_CAT1 | rna-NM_001180421.3_CAT1 | cds-NP_010398.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:642464-643585:- | gene-YDR113C_CBS1585 | rna-NM_001180421.3_CBS1585 | cds-NP_010398.3_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:668352-669473:- | gene-YDR113C_CBS436 | rna-NM_001180421.3_CBS436 | cds-NP_010398.3_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:638816-639937:- | gene-YDR113C_CBS6412 | rna-NM_001180421.3_CBS6412 | cds-NP_010398.3_CBS6412 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:667793-668914:- | gene-YDR113C_CBS6413 | rna-NM_001180421.3_CBS6413 | cds-NP_010398.3_CBS6413 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:672936-674057:- | gene-YDR113C_CENPK1137D | rna-NM_001180421.3_CENPK1137D | cds-NP_010398.3_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:653197-654318:- | gene-YDR113C_EthanolRed | rna-NM_001180421.3_EthanolRed | cds-NP_010398.3_EthanolRed | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:659991-661112:- | gene-YDR113C_FaliES1 | rna-NM_001180421.3_FaliES1 | cds-NP_010398.3_FaliES1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000002.1:12097-13221:- | gene-YDR113C_JAY291 | rna-NM_001180421.3_JAY291 | cds-NP_010398.3_JAY291 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:669413-670534:- | gene-YDR113C_MUCL30387 | rna-NM_001180421.3_MUCL30387 | cds-NP_010398.3_MUCL30387 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:658432-659553:- | gene-YDR113C_MUCL30388 | rna-NM_001180421.3_MUCL30388 | cds-NP_010398.3_MUCL30388 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:643807-644928:- | gene-YDR113C_MUCL39482 | rna-NM_001180421.3_MUCL39482 | cds-NP_010398.3_MUCL39482 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:581760-582881:- | gene-YDR113C_MUCL42920 | rna-NM_001180421.3_MUCL42920 | cds-NP_010398.3_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:680419-681540:- | gene-YDR113C_NCIM3186 | rna-NM_001180421.3_NCIM3186 | cds-NP_010398.3_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:643211-644332:- | gene-YDR113C_NCYC1407 | rna-NM_001180421.3_NCYC1407 | cds-NP_010398.3_NCYC1407 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:662529-663650:- | gene-YDR113C_PE2H3 | rna-NM_001180421.3_PE2H3 | cds-NP_010398.3_PE2H3 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:661834-662955:- | gene-YDR113C_PE2H4 | rna-NM_001180421.3_PE2H4 | cds-NP_010398.3_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:680496-681617:- | gene-YDR113C_S288C | rna-NM_001180421.3_S288C | cds-NP_010398.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000009.1:29145-30266:- | gene-YDR113C_SA1 | rna-NM_001180421.3_SA1 | cds-NP_010398.3_SA1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:659513-660634:- | gene-YDR113C_ThermosaccDry | rna-NM_001180421.3_ThermosaccDry | cds-NP_010398.3_ThermosaccDry | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:672851-673972:- | gene-YDR113C_VR1 | rna-NM_001180421.3_VR1 | cds-NP_010398.3_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:657099-658220:- | gene-YDR113C_ZTW1 | rna-NM_001180421.3_ZTW1 | cds-NP_010398.3_ZTW1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:661538-662665:- | gene-YDR113C_Sparadoxus | rna-NM_001180421.3_Sparadoxus | cds-NP_010398.3_Sparadoxus | 85.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |